RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 FAM181BA6NEQ2 426 aa13.66□□□□□ -0.22
ERBB2-205ENST00000578199 CLEC3BP05452 202 aa13.66□□□□□ -0.22
ERBB2-205ENST00000578199 IGHV3OR16-13A0A075B7E8 117 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 IGHV3-74A0A0B4J1X5 117 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 TRBV6-1A0A0K0K1D8 114 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 IGHV4-39P01824 125 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 RHOGP84095 191 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 OR4B1Q8NGF8 309 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 MIEN1Q9BRT3 115 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 RABAC1Q9UI14 185 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 MUC21A0A0G2JKD1 596 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 CENPVL3A0A0U1RRI6 287 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 MUC21A0A140T8X8 626 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 RPLP1P05386 114 aaKnown RBP13.65□□□□□ -0.22
ERBB2-205ENST00000578199 SPATA45Q537H7 98 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 MUC21Q5SSG8 566 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 Q8TAT8 98 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 LINC00527Q9UJ94 153 aa13.65□□□□□ -0.22
ERBB2-205ENST00000578199 SOX21Q9Y651 276 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-205ENST00000578199 LOC102724200A0A096LPH7 203 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-205ENST00000578199 FAM231BA6NCW3 169 aa13.64□□□□□ -0.23
ERBB2-205ENST00000578199 HAX1O00165 279 aa13.64□□□□□ -0.23
ERBB2-205ENST00000578199 NPFFO15130 113 aa13.64□□□□□ -0.23
ERBB2-205ENST00000578199 PDE6HQ13956 83 aa13.64□□□□□ -0.23
ERBB2-205ENST00000578199 COTL1Q14019 142 aa13.64□□□□□ -0.23
ERBB2-205ENST00000578199 SPATA12Q7Z6I5 190 aa13.64□□□□□ -0.23
ERBB2-205ENST00000578199 IGHG4P01861 327 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 RPL7P18124 248 aaKnown RBP13.63□□□□□ -0.23
ERBB2-205ENST00000578199 CSN1S1P47710 185 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 BRD3OSQ6XYD6 125 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 LINC00173Q6ZV60 143 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 FAM110DQ8TAY7 271 aaPredicted RBP13.63□□□□□ -0.23
ERBB2-205ENST00000578199 VGLL1Q99990 258 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 SPG11Q96JI7 2443 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 A0A1B0GUT8 65 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 M0QZK8 103 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 CSN3P07498 182 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 S100A7AQ86SG5 101 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 ZNF502Q8TBZ5 544 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 PIEZO1Q92508 2521 aa13.63□□□□□ -0.23
ERBB2-205ENST00000578199 IGHV3-49A0A0A0MS15 119 aa13.62□□□□□ -0.23
ERBB2-205ENST00000578199 CTRLP40313 264 aa13.62□□□□□ -0.23
ERBB2-205ENST00000578199 C2orf70A6NJV1 201 aa13.62□□□□□ -0.23
ERBB2-205ENST00000578199 PSG9Q00887 426 aa13.62□□□□□ -0.23
ERBB2-205ENST00000578199 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.61□□□□□ -0.23
ERBB2-205ENST00000578199 ZNF207O43670 478 aaKnown RBP13.61□□□□□ -0.23
ERBB2-205ENST00000578199 CT45A10P0DMU9 189 aa13.61□□□□□ -0.23
ERBB2-205ENST00000578199 IGHV1-24A0A0C4DH33 117 aa13.61□□□□□ -0.23
ERBB2-205ENST00000578199 SH2D1AO60880 128 aa13.61□□□□□ -0.23
ERBB2-205ENST00000578199 ZNF80P51504 273 aaPredicted RBP13.61□□□□□ -0.23
ERBB2-205ENST00000578199 CCDC140Q96MF4 163 aa13.61□□□□□ -0.23
ERBB2-205ENST00000578199 TIMM8BQ9Y5J9 83 aaPredicted RBP13.61□□□□□ -0.23
ERBB2-205ENST00000578199 RNF182Q8N6D2 247 aa13.6□□□□□ -0.23
ERBB2-205ENST00000578199 NDFIP1Q9BT67 221 aa13.6□□□□□ -0.23
ERBB2-205ENST00000578199 ERCC8Q13216 396 aa13.6□□□□□ -0.23
ERBB2-205ENST00000578199 BATFQ16520 125 aa13.6□□□□□ -0.23
ERBB2-205ENST00000578199 PRR25Q96S07 402 aa13.6□□□□□ -0.23
ERBB2-205ENST00000578199 TXN2Q99757 166 aa13.6□□□□□ -0.23
ERBB2-205ENST00000578199 ZFAND3Q9H8U3 227 aa13.6□□□□□ -0.23
ERBB2-205ENST00000578199 IGHV4-61A0A0C4DH41 118 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 TMEM213A2RRL7 107 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 SAPCD1Q5SSQ6 148 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 LYZL1Q6UWQ5 148 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 IGSF10Q6WRI0 2623 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 TMEM189A5PLL7 270 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 PRAC2D3DTV9 90 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 C5orf56Q8N8D9 126 aa13.59□□□□□ -0.23
ERBB2-205ENST00000578199 SERTM2A0A1B0GWG4 89 aa13.58□□□□□ -0.23
ERBB2-205ENST00000578199 RIGQ13278 110 aa13.58□□□□□ -0.23
ERBB2-205ENST00000578199 MRPL52Q86TS9 123 aaKnown RBP13.58□□□□□ -0.23
ERBB2-205ENST00000578199 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.23
ERBB2-205ENST00000578199 CLPSL1A2RUU4 121 aa13.58□□□□□ -0.24
ERBB2-205ENST00000578199 BUB3O43684 328 aa13.58□□□□□ -0.24
ERBB2-205ENST00000578199 SCGB2A1O75556 95 aa13.58□□□□□ -0.24
ERBB2-205ENST00000578199 TRAV40A0A0B4J280 105 aa13.57□□□□□ -0.24
ERBB2-205ENST00000578199 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
ERBB2-205ENST00000578199 IGLC3P0DOY3 106 aa13.56□□□□□ -0.24
ERBB2-205ENST00000578199 PIFOQ8TCI5 191 aa13.56□□□□□ -0.24
ERBB2-205ENST00000578199 H0Y8G0 127 aa13.56□□□□□ -0.24
ERBB2-205ENST00000578199 PAX8Q06710 450 aa13.56□□□□□ -0.24
ERBB2-205ENST00000578199 CHCHD1Q96BP2 118 aaKnown RBP13.56□□□□□ -0.24
ERBB2-205ENST00000578199 LEPROTL1O95214 131 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 GOSR1O95249 250 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 TMEM70Q9BUB7 260 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 USP9XQ93008 2570 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-205ENST00000578199 IGHV4-38-2P0DP08 117 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 LY6EQ16553 131 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 ZNF575Q86XF7 245 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 CCL19Q99731 98 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 SPOCK3Q9BQ16 436 aa13.55□□□□□ -0.24
ERBB2-205ENST00000578199 TCF21O43680 179 aa13.54□□□□□ -0.24
ERBB2-205ENST00000578199 RBX1P62877 108 aa13.54□□□□□ -0.24
ERBB2-205ENST00000578199 FAM106AQ4KMX7 169 aa13.54□□□□□ -0.24
ERBB2-205ENST00000578199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.54□□□□□ -0.24
ERBB2-205ENST00000578199 AMN1Q8IY45 258 aa13.54□□□□□ -0.24
ERBB2-205ENST00000578199 Q6ZN92 141 aa13.54□□□□□ -0.24
ERBB2-205ENST00000578199 EEF1AKMT3Q96AZ1 226 aa13.54□□□□□ -0.24
ERBB2-205ENST00000578199 TP73-AS1Q9UF72 201 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 286.9 ms