RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 CHEK1O14757 476 aa21.27■■□□□ 1
LIMD2-203ENST00000578067 IGFL4Q6B9Z1 124 aa21.27■■□□□ 1
LIMD2-203ENST00000578067 NUP35Q8NFH5 326 aa21.27■■□□□ 1
LIMD2-203ENST00000578067 ZC2HC1AQ96GY0 325 aa21.27■■□□□ 1
LIMD2-203ENST00000578067 NEU1Q99519 415 aa21.27■■□□□ 1
LIMD2-203ENST00000578067 A8MWL6 223 aa21.26■□□□□ 0.99
LIMD2-203ENST00000578067 MEOX2P50222 304 aa21.26■□□□□ 0.99
LIMD2-203ENST00000578067 MRPL54Q6P161 138 aaKnown RBP21.26■□□□□ 0.99
LIMD2-203ENST00000578067 SLC50A1Q9BRV3 221 aa21.26■□□□□ 0.99
LIMD2-203ENST00000578067 NPIPB6E9PJ23 425 aa21.26■□□□□ 0.99
LIMD2-203ENST00000578067 HOXA3O43365 443 aaPredicted RBP21.26■□□□□ 0.99
LIMD2-203ENST00000578067 MT-ND6P03923 174 aa21.26■□□□□ 0.99
LIMD2-203ENST00000578067 PDZD11Q5EBL8 140 aa21.26■□□□□ 0.99
LIMD2-203ENST00000578067 IGKV2-40A0A087WW87 121 aaPredicted RBP21.25■□□□□ 0.99
LIMD2-203ENST00000578067 FBLL1A6NHQ2 334 aaKnown RBP21.25■□□□□ 0.99
LIMD2-203ENST00000578067 IGKV2D-40P01614 121 aaPredicted RBP21.25■□□□□ 0.99
LIMD2-203ENST00000578067 PSMB8P28062 276 aa21.25■□□□□ 0.99
LIMD2-203ENST00000578067 HLA-DMBP28068 263 aa21.25■□□□□ 0.99
LIMD2-203ENST00000578067 FAM209BQ5JX69 171 aa21.25■□□□□ 0.99
LIMD2-203ENST00000578067 UNQ9165/PRO28630Q6UXU0 137 aa21.25■□□□□ 0.99
LIMD2-203ENST00000578067 OR4B1Q8NGF8 309 aa21.25■□□□□ 0.99
LIMD2-203ENST00000578067 C12orf57Q99622 126 aa21.25■□□□□ 0.99
LIMD2-203ENST00000578067 ASCL2Q99929 193 aa21.25■□□□□ 0.99
LIMD2-203ENST00000578067 TMEM89A2RUT3 159 aa21.24■□□□□ 0.99
LIMD2-203ENST00000578067 HIGD1CA8MV81 97 aa21.24■□□□□ 0.99
LIMD2-203ENST00000578067 C16orf54Q6UWD8 224 aa21.24■□□□□ 0.99
LIMD2-203ENST00000578067 TMEM136Q6ZRR5 245 aa21.24■□□□□ 0.99
LIMD2-203ENST00000578067 S100A2P29034 98 aa21.24■□□□□ 0.99
LIMD2-203ENST00000578067 LCN12Q6JVE5 192 aa21.24■□□□□ 0.99
LIMD2-203ENST00000578067 RASL11AQ6T310 242 aa21.23■□□□□ 0.99
LIMD2-203ENST00000578067 ZANQ9Y493 2812 aa21.23■□□□□ 0.99
LIMD2-203ENST00000578067 ZNF705FA8MVS1 300 aaPredicted RBP21.22■□□□□ 0.99
LIMD2-203ENST00000578067 SMIM6P0DI80 62 aa21.22■□□□□ 0.99
LIMD2-203ENST00000578067 WIPF2Q8TF74 440 aaPredicted RBP21.22■□□□□ 0.99
LIMD2-203ENST00000578067 NPFFR1Q9GZQ6 430 aa21.22■□□□□ 0.99
LIMD2-203ENST00000578067 GFRA4Q9GZZ7 299 aa21.22■□□□□ 0.99
LIMD2-203ENST00000578067 RAB4BP61018 213 aa21.21■□□□□ 0.99
LIMD2-203ENST00000578067 TCF24Q7RTU0 167 aa21.21■□□□□ 0.99
LIMD2-203ENST00000578067 GLMPQ8WWB7 406 aa21.21■□□□□ 0.99
LIMD2-203ENST00000578067 SMAD7O15105 426 aaKnown RBP21.21■□□□□ 0.99
LIMD2-203ENST00000578067 HLA-DQA1P01909 254 aa21.21■□□□□ 0.99
LIMD2-203ENST00000578067 SAPCD1Q5SSQ6 148 aa21.21■□□□□ 0.99
LIMD2-203ENST00000578067 C8orf49Q96NF6 230 aa21.21■□□□□ 0.99
LIMD2-203ENST00000578067 PEF1Q9UBV8 284 aaKnown RBP21.21■□□□□ 0.99
LIMD2-203ENST00000578067 ZNF702PQ9H963 129 aa21.2■□□□□ 0.98
LIMD2-203ENST00000578067 FAM231BA6NCW3 169 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 TEX29Q8N6K0 151 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 OR2D3Q8NGH3 330 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 GTSF1Q8WW33 167 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 CT45A10P0DMU9 189 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 CRIP1P50238 77 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 C10orf99Q6UWK7 81 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 C8orf86Q6ZUL3 223 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 COX8CQ7Z4L0 72 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 ATP5L2Q7Z4Y8 100 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 RNF182Q8N6D2 247 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 VGLL1Q99990 258 aa21.19■□□□□ 0.98
LIMD2-203ENST00000578067 FABP4P15090 132 aa21.18■□□□□ 0.98
LIMD2-203ENST00000578067 PRR25Q96S07 402 aa21.18■□□□□ 0.98
LIMD2-203ENST00000578067 CREBBPQ92793 2442 aa21.18■□□□□ 0.98
LIMD2-203ENST00000578067 TRAV8-2A0A0B4J237 113 aa21.17■□□□□ 0.98
LIMD2-203ENST00000578067 HIST1H2BLQ99880 126 aa21.17■□□□□ 0.98
LIMD2-203ENST00000578067 SIGLECL1Q8N7X8 197 aa21.17■□□□□ 0.98
LIMD2-203ENST00000578067 OR10D4PQ8NGN7 298 aa21.17■□□□□ 0.98
LIMD2-203ENST00000578067 A0A1W2PS18 150 aa21.16■□□□□ 0.98
LIMD2-203ENST00000578067 RBAKDNA6NC62 111 aa21.16■□□□□ 0.98
LIMD2-203ENST00000578067 RBPMS2Q6ZRY4 209 aaKnown RBP21.16■□□□□ 0.98
LIMD2-203ENST00000578067 MRPL53Q96EL3 112 aaKnown RBP21.16■□□□□ 0.98
LIMD2-203ENST00000578067 CRISP2P16562 243 aa21.16■□□□□ 0.98
LIMD2-203ENST00000578067 PRAC2D3DTV9 90 aa21.15■□□□□ 0.98
LIMD2-203ENST00000578067 IL17RELQ6ZVW7 336 aa21.15■□□□□ 0.98
LIMD2-203ENST00000578067 PGLYRP4Q96LB8 373 aa21.15■□□□□ 0.98
LIMD2-203ENST00000578067 A0A1B0GXF2 115 aa21.14■□□□□ 0.98
LIMD2-203ENST00000578067 GRIFINA4D1Z8 144 aa21.14■□□□□ 0.98
LIMD2-203ENST00000578067 Q8TAT8 98 aa21.14■□□□□ 0.98
LIMD2-203ENST00000578067 CLEC5AQ9NY25 188 aa21.14■□□□□ 0.98
LIMD2-203ENST00000578067 APCSP02743 223 aa21.14■□□□□ 0.97
LIMD2-203ENST00000578067 FOXE3Q13461 319 aa21.14■□□□□ 0.97
LIMD2-203ENST00000578067 RPLP1P05386 114 aaKnown RBP21.13■□□□□ 0.97
LIMD2-203ENST00000578067 GZMBP10144 247 aa21.13■□□□□ 0.97
LIMD2-203ENST00000578067 FOXA3P55318 350 aaPredicted RBP21.13■□□□□ 0.97
LIMD2-203ENST00000578067 FAM106AQ4KMX7 169 aa21.13■□□□□ 0.97
LIMD2-203ENST00000578067 GDF5OSQ5U4N7 250 aa21.13■□□□□ 0.97
LIMD2-203ENST00000578067 FOXC2Q99958 501 aa21.13■□□□□ 0.97
LIMD2-203ENST00000578067 ELANEP08246 267 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 C16orf92Q96LL3 132 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 NDFIP1Q9BT67 221 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 DAZ1Q9NQZ3 744 aaKnown RBP21.12■□□□□ 0.97
LIMD2-203ENST00000578067 IGHV7-4-1A0A0J9YVY3 117 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 AMBPP02760 352 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 ERCC8Q13216 396 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 KIAA1644Q3SXP7 199 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 FAM162BQ5T6X4 162 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 GPHB5Q86YW7 130 aa21.12■□□□□ 0.97
LIMD2-203ENST00000578067 PACRGQ96M98 296 aaPredicted RBP21.12■□□□□ 0.97
LIMD2-203ENST00000578067 A0A1B0GUS0 222 aa21.11■□□□□ 0.97
LIMD2-203ENST00000578067 K7EMT4 169 aa21.11■□□□□ 0.97
LIMD2-203ENST00000578067 CAMPP49913 170 aa21.11■□□□□ 0.97
LIMD2-203ENST00000578067 HBBP68871 147 aa21.11■□□□□ 0.97
LIMD2-203ENST00000578067 TM4SF20Q53R12 229 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms