RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 H3BRM9 83 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 GABARAPH6UMI1 98 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 FAM107AO95990 144 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 DNAL4O96015 105 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 PSG9Q00887 426 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 EIF3IQ13347 325 aaKnown RBP0.89□□□□□ -2.27
CDC27-219ENST00000576484 SPRNQ5BIV9 151 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 THEM6Q8WUY1 208 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 DIRC1Q969H9 104 aa0.89□□□□□ -2.27
CDC27-219ENST00000576484 TCEAL2Q9H3H9 227 aaPredicted RBP0.89□□□□□ -2.27
CDC27-219ENST00000576484 MCM3APO60318 1980 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 PLXNA4Q9HCM2 1894 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 MYO5AQ9Y4I1 1855 aaKnown RBP0.88□□□□□ -2.27
CDC27-219ENST00000576484 HEATR1Q9H583 2144 aaKnown RBP0.88□□□□□ -2.27
CDC27-219ENST00000576484 CECR2Q9BXF3 1484 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 S100A11P31949 105 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 MRPS36P82909 103 aaKnown RBP0.88□□□□□ -2.27
CDC27-219ENST00000576484 CIRBPQ14011 172 aaKnown RBP0.88□□□□□ -2.27
CDC27-219ENST00000576484 HAGHLQ6PII5 290 aaPredicted RBP0.88□□□□□ -2.27
CDC27-219ENST00000576484 GKN2Q86XP6 184 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 RMND5BQ96G75 393 aaPredicted RBP0.88□□□□□ -2.27
CDC27-219ENST00000576484 EFCAB11Q9BUY7 163 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 KIAA1107Q9UPP5 1409 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 UNC13CQ8NB66 2214 aa0.88□□□□□ -2.27
CDC27-219ENST00000576484 MT-ND6P03923 174 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 FABP2P12104 132 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 SDC2P34741 201 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 NDUFA6P56556 154 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 TMEM128Q5BJH2 165 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 PLPP5Q8NEB5 264 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 OR4B1Q8NGF8 309 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 OR9Q1Q8NGQ5 310 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 CCL4L1Q8NHW4 92 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 PSMF1Q92530 271 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 ZC2HC1AQ96GY0 325 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 AMELYQ99218 206 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 TMEM138Q9NPI0 162 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 TNFSF18Q9UNG2 199 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 MED31Q9Y3C7 131 aa0.87□□□□□ -2.27
CDC27-219ENST00000576484 N4BP2Q86UW6 1770 aaPredicted RBP0.86□□□□□ -2.27
CDC27-219ENST00000576484 MYLKQ15746 1914 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 TRBV7-6A0A0J9YX20 115 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 PRORSD1PA6NEY8 169 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 H0YJX3 145 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 KLF7O75840 302 aaPredicted RBP0.86□□□□□ -2.27
CDC27-219ENST00000576484 PRB4P10163 310 aaPredicted RBP0.86□□□□□ -2.27
CDC27-219ENST00000576484 POLR2HP52434 150 aaKnown RBP0.86□□□□□ -2.27
CDC27-219ENST00000576484 FOXI2Q6ZQN5 318 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 OR4C12Q96R67 309 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 TAF9BQ9HBM6 251 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 HSPB8Q9UJY1 196 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 TPRKBQ9Y3C4 175 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 BCL9O00512 1426 aa0.86□□□□□ -2.27
CDC27-219ENST00000576484 GNG14A0A1W2PPG7 69 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 C9orf170A2RU37 121 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 C5orf67F2Z3F1 127 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 IGHV3-33P01772 117 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 FABP4P15090 132 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 RPL7P18124 248 aaKnown RBP0.85□□□□□ -2.27
CDC27-219ENST00000576484 COL24A1Q17RW2 1714 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 SAMD13Q5VXD3 122 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 LINC00269Q8N2A0 174 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 OR5H6Q8NGV6 325 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 GRPEL2Q8TAA5 225 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 PRELID3AQ96N28 172 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 LXNQ9BS40 222 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 CST11Q9H112 138 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 NDUFAF1Q9Y375 327 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
CDC27-219ENST00000576484 MGAMO43451 1857 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 MYO18AQ92614 2054 aaKnown RBP0.84□□□□□ -2.27
CDC27-219ENST00000576484 ALPK3Q96L96 1907 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.84□□□□□ -2.27
CDC27-219ENST00000576484 TRBV27A0A0K0K1C4 114 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 TSTD3H0UI37 97 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 NBEAP1P0C6P0 100 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 S100GP29377 79 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 DR1Q01658 176 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 MIR22HGQ0VDD5 57 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 HRCT1Q6UXD1 115 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 LINC00305Q7Z4B0 112 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 SKA2Q8WVK7 121 aaPredicted RBP0.84□□□□□ -2.27
CDC27-219ENST00000576484 CCDC115Q96NT0 180 aa0.84□□□□□ -2.27
CDC27-219ENST00000576484 COL1A1P02452 1464 aaPredicted RBP0.84□□□□□ -2.28
CDC27-219ENST00000576484 A0A096LPI6 279 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 JMJD7-PLA2G4BH0Y9G9 81 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 H3BMG7 143 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 NCR3O14931 201 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 TPT1P13693 172 aaKnown RBP0.83□□□□□ -2.28
CDC27-219ENST00000576484 SRP9P49458 86 aaKnown RBP0.83□□□□□ -2.28
CDC27-219ENST00000576484 DIAPH2-AS1Q14236 149 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 VMA21Q3ZAQ7 101 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 TAC4Q86UU9 113 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 MRPL40Q9NQ50 206 aaKnown RBP0.83□□□□□ -2.28
CDC27-219ENST00000576484 TRAPPC2LQ9UL33 140 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 HSPB11Q9Y547 144 aa0.83□□□□□ -2.28
CDC27-219ENST00000576484 SNRNP200O75643 2136 aaKnown RBP0.82□□□□□ -2.28
CDC27-219ENST00000576484 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
CDC27-219ENST00000576484 TCOF1Q13428 1488 aaKnown RBP0.82□□□□□ -2.28
CDC27-219ENST00000576484 PEAK1Q9H792 1746 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms