RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NDUFA4L2Q9NRX3 87 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 LINC00588Q9Y4M8 146 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 C3orf85A0A1B0GTC6 90 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 TEX50A0A1B0GTY4 177 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 SMCO3A2RU48 225 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 F5H768 121 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 H3BMM0 161 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 TEX46H3BTG2 121 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 I3L2K1 104 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 M0R036 132 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 PGLYRP1O75594 196 aaPredicted RBP4.12□□□□□ -1.75
SMG6-219ENST00000575663 SLC25A4P12235 298 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 HLA-DRB4P13762 266 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 PVALBP20472 110 aaPredicted RBP4.12□□□□□ -1.75
SMG6-219ENST00000575663 SUPT4H1P63272 117 aaKnown RBP4.12□□□□□ -1.75
SMG6-219ENST00000575663 FCN2Q15485 313 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 RNF151Q2KHN1 245 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 RRN3P1Q2M238 152 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 DMRTA1Q5VZB9 504 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 BOD1L2Q8IYS8 172 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 OR11H7Q8NGC8 314 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 SECTM1Q8WVN6 248 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 PINX1Q96BK5 328 aaKnown RBP4.12□□□□□ -1.75
SMG6-219ENST00000575663 C2orf50Q96LR7 162 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 TMEM208Q9BTX3 173 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 FXYD6Q9H0Q3 95 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 ARV1Q9H2C2 271 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 PLEKHA2Q9HB19 425 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 MED9Q9NWA0 146 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 FKBP11Q9NYL4 201 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 OR51B2Q9Y5P1 312 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 HLA-DRB4X5D2U9 266 aa4.12□□□□□ -1.75
SMG6-219ENST00000575663 NACAE9PAV3 2078 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 A0A1B0GU03 582 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 LYRM9A8MSI8 78 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 C1orf196B1AJZ1 125 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 FAM90A26D6RGX4 464 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 ADAP1O75689 374 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 CXCL3P19876 107 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 CRYBB3P26998 211 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 S100A2P29034 98 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 FXYD4P59646 89 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 HERV-K104P63124 156 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 IL15RAQ13261 267 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 VAMP3Q15836 100 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 ZNF818PQ6ZRF7 136 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 TBC1D26Q86UD7 250 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 C9orf62Q8N4C0 152 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 ZNF114Q8NC26 417 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 OR2T35Q8NGX2 323 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 OR51H1Q8NH63 302 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 GPHA2Q96T91 129 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 MAGT1Q9H0U3 335 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 CCL28Q9NRJ3 127 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 PRNDQ9UKY0 176 aa4.11□□□□□ -1.75
SMG6-219ENST00000575663 A0A0D9SG52 128 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 M0R143 59 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 IGHV3-48P01763 117 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 PLA2G1BP04054 148 aaKnown RBP4.1□□□□□ -1.75
SMG6-219ENST00000575663 ATP5G1P05496 136 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 OR5AC1P0C628 307 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 OR10J4P0C629 311 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 NKX2-1P43699 371 aaPredicted RBP4.1□□□□□ -1.75
SMG6-219ENST00000575663 ATP5G3P48201 142 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 H2BFSP57053 126 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 LINC00315P59091 139 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 OR2F1Q13607 317 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 ZNF345Q14585 488 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 TMEM144Q7Z5S9 345 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 THAP6Q8TBB0 222 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 DEFB104AQ8WTQ1 72 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 RNF141Q8WVD5 230 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 SFRP2Q96HF1 295 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 UPK3BQ9BT76 320 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 FNDC4Q9H6D8 234 aaPredicted RBP4.1□□□□□ -1.75
SMG6-219ENST00000575663 NRN1Q9NPD7 142 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 ZNF586Q9NXT0 402 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 NSG2Q9Y328 171 aa4.1□□□□□ -1.75
SMG6-219ENST00000575663 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
SMG6-219ENST00000575663 C20orf202A1L168 122 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 K7ERU9 68 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 CORTO00230 105 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 TAAR5O14804 337 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 MPC2O95563 127 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 DEFB130BP0DP73 79 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 DEFB130AP0DP74 79 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 PI3P19957 117 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 FUSP35637 526 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMG6-219ENST00000575663 AKR1C3P42330 323 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 FXYD7P58549 80 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 TAS2R30P59541 319 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 KRTAP10-1P60331 282 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 EIF5AP63241 154 aaKnown RBP4.09□□□□□ -1.75
SMG6-219ENST00000575663 ERHP84090 104 aaKnown RBP4.09□□□□□ -1.75
SMG6-219ENST00000575663 ID3Q02535 119 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 RAB32Q13637 225 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 IAH1Q2TAA2 248 aaPredicted RBP4.09□□□□□ -1.75
SMG6-219ENST00000575663 PHLDA2Q53GA4 152 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms