RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 MIFP14174 115 aa10.89□□□□□ -0.67
TRAPPC1-207ENST00000575639 RAB2AP61019 212 aa10.89□□□□□ -0.67
TRAPPC1-207ENST00000575639 UBE2L3P68036 154 aaKnown RBP10.89□□□□□ -0.67
TRAPPC1-207ENST00000575639 PQLC2Q6ZP29 291 aa10.89□□□□□ -0.67
TRAPPC1-207ENST00000575639 GOLT1BQ9Y3E0 138 aa10.89□□□□□ -0.67
TRAPPC1-207ENST00000575639 ZNF345Q14585 488 aa10.88□□□□□ -0.67
TRAPPC1-207ENST00000575639 FAM122CQ6P4D5 195 aa10.88□□□□□ -0.67
TRAPPC1-207ENST00000575639 AMTNQ6UX39 209 aa10.88□□□□□ -0.67
TRAPPC1-207ENST00000575639 FXYD5Q96DB9 178 aa10.88□□□□□ -0.67
TRAPPC1-207ENST00000575639 C11orf68Q9H3H3 251 aaKnown RBP10.88□□□□□ -0.67
TRAPPC1-207ENST00000575639 A0A0D9SG52 128 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 BOLA2-SMG1P6H3BVE0 249 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 TSPOP30536 169 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 CDC34P49427 236 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 ICAM4Q14773 271 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 LYPD1Q8N2G4 141 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 KCNRGQ8N5I3 272 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 IGF2BP2-AS1Q96M15 143 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 ARPC5LQ9BPX5 153 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 TMEM208Q9BTX3 173 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 SH3BGRL3Q9H299 93 aa10.87□□□□□ -0.67
TRAPPC1-207ENST00000575639 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 IGHV4-28A0A0C4DH34 117 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 SMIM9A6NGZ8 99 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 INSP01308 110 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 CSN1S1P47710 185 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 RANP62826 216 aaKnown RBP10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 CASC10Q5T4H9 136 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 ZFAND6Q6FIF0 208 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 ZNF705AQ6ZN79 300 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 RPP25LQ8N5L8 163 aaKnown RBP10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 OR11H4Q8NGC9 324 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 ZNF503Q96F45 646 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 NEU1Q99519 415 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 ACTR3CQ9C0K3 210 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 X6R8D5 127 aa10.86□□□□□ -0.67
TRAPPC1-207ENST00000575639 AGRNO00468 2067 aa10.85□□□□□ -0.67
TRAPPC1-207ENST00000575639 KANTRA0A1W2PQU2 76 aa10.85□□□□□ -0.67
TRAPPC1-207ENST00000575639 M0R2Z0 102 aa10.85□□□□□ -0.67
TRAPPC1-207ENST00000575639 M0R3E3 92 aa10.85□□□□□ -0.67
TRAPPC1-207ENST00000575639 AKR1C8PQ5T2L2 129 aa10.85□□□□□ -0.67
TRAPPC1-207ENST00000575639 Q8NAQ8 132 aa10.85□□□□□ -0.67
TRAPPC1-207ENST00000575639 RAB24Q969Q5 203 aa10.85□□□□□ -0.67
TRAPPC1-207ENST00000575639 TMEM189A5PLL7 270 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 DEFB4AO15263 64 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 HMGB3O15347 200 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 HBE1P02100 147 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 PRB4P10163 310 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 CDKN1BP46527 198 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 EIF5AP63241 154 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 FAM74A1Q5RGS3 127 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 TCTE3Q8IZS6 198 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 C11orf45Q8TAV5 145 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 PHYHIPLQ96FC7 376 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 ST6GAL2Q96JF0 529 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 LINC00477Q96M19 166 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 CYTL1Q9NRR1 136 aa10.84□□□□□ -0.67
TRAPPC1-207ENST00000575639 CXorf65A6NEN9 183 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 NPIPB6E9PJ23 425 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 PFDN1O60925 122 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 EIF3GO75821 320 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 STAG3L2P0CL84 134 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 STAG3L3P0CL85 134 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 LEPP41159 167 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 RXFP4Q8TDU9 374 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 ODF3Q96PU9 254 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 Q9H3A6 140 aa10.83□□□□□ -0.68
TRAPPC1-207ENST00000575639 RYR2Q92736 4967 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 CRXO43186 299 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 BCL2L11O43521 198 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 CXorf1O96002 111 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 RBMY1A1P0DJD3 496 aaKnown RBP10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 RBMY1CP0DJD4 496 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 RRN3P1Q2M238 152 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 TMEM78Q5T7P6 136 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 AKAP14Q86UN6 197 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 BAP18Q8IXM2 172 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 TMEM256Q8N2U0 113 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 CMTM2Q8TAZ6 248 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 ZNF471Q9BX82 626 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 OTORQ9NRC9 128 aa10.82□□□□□ -0.68
TRAPPC1-207ENST00000575639 CT45A10P0DMU9 189 aa10.81□□□□□ -0.68
TRAPPC1-207ENST00000575639 PMS2P11Q13670 270 aa10.81□□□□□ -0.68
TRAPPC1-207ENST00000575639 TMUB2Q71RG4 321 aa10.81□□□□□ -0.68
TRAPPC1-207ENST00000575639 HYLS1Q96M11 299 aa10.81□□□□□ -0.68
TRAPPC1-207ENST00000575639 LINC01587Q99440 93 aa10.81□□□□□ -0.68
TRAPPC1-207ENST00000575639 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
TRAPPC1-207ENST00000575639 IGKV2-40A0A087WW87 121 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 CTXND1A0A1B0GTU2 59 aa10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 PGPA6NDG6 321 aa10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 IGKV2D-40P01614 121 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 GCHFRP30047 84 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms