RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ZFAND6Q6FIF0 208 aa9.74□□□□□ -0.85
RPAIN-216ENST00000575599 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
RPAIN-216ENST00000575599 MBD3L1Q8WWY6 194 aa9.74□□□□□ -0.85
RPAIN-216ENST00000575599 RNF183Q96D59 192 aa9.74□□□□□ -0.85
RPAIN-216ENST00000575599 LINC00052Q96N35 136 aa9.74□□□□□ -0.85
RPAIN-216ENST00000575599 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
RPAIN-216ENST00000575599 DNAH7Q8WXX0 4024 aa9.73□□□□□ -0.85
RPAIN-216ENST00000575599 TRAV5A0A0B4J249 113 aa9.73□□□□□ -0.85
RPAIN-216ENST00000575599 EIF3GO75821 320 aaKnown RBP eCLIP9.73□□□□□ -0.85
RPAIN-216ENST00000575599 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
RPAIN-216ENST00000575599 ZNF726P1Q15940 193 aa9.73□□□□□ -0.85
RPAIN-216ENST00000575599 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
RPAIN-216ENST00000575599 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
RPAIN-216ENST00000575599 OR51M1Q9H341 326 aa9.73□□□□□ -0.85
RPAIN-216ENST00000575599 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
RPAIN-216ENST00000575599 AGRNO00468 2067 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 KRTAP4-8A0A0G2JLE6 195 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 NMBP08949 121 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 STAG3L2P0CL84 134 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 STAG3L3P0CL85 134 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 RPL7P18124 248 aaKnown RBP9.72□□□□□ -0.85
RPAIN-216ENST00000575599 ID1P41134 155 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 PSMB3P49720 205 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 CASC10Q5T4H9 136 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 GPR82Q96P67 336 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
RPAIN-216ENST00000575599 TRAV1-1A0A0B4J248 108 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 A0A0J9YWU9 116 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 SOCS3O14543 225 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 IFNA1P01562 189 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 ARL14EPLP0DKL9 152 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 ATF4P18848 351 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-216ENST00000575599 PPT1P50897 306 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 DEFB1P60022 68 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 UBE2L3P68036 154 aaKnown RBP9.71□□□□□ -0.86
RPAIN-216ENST00000575599 SSX7Q7RTT5 188 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 C16orf92Q96LL3 132 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 SLC25A2Q9BXI2 301 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 TMEM167BQ9NRX6 74 aa9.71□□□□□ -0.86
RPAIN-216ENST00000575599 GCHFRP30047 84 aa9.7□□□□□ -0.86
RPAIN-216ENST00000575599 MEOX2P50222 304 aa9.7□□□□□ -0.86
RPAIN-216ENST00000575599 SAMD13Q5VXD3 122 aa9.7□□□□□ -0.86
RPAIN-216ENST00000575599 MORN5Q5VZ52 161 aa9.7□□□□□ -0.86
RPAIN-216ENST00000575599 MORN3Q6PF18 240 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-216ENST00000575599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.7□□□□□ -0.86
RPAIN-216ENST00000575599 ISLRO14498 428 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 OR10J4P0C629 311 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 GDF5OSQ5U4N7 250 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 OR11H2Q8NH07 326 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 FAM167A-AS1Q96KT0 104 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 RARRES2Q99969 163 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 CLEC5AQ9NY25 188 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 TMEM14CQ9P0S9 112 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 GNG13Q9P2W3 67 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 STARD9Q9P2P6 4700 aa9.69□□□□□ -0.86
RPAIN-216ENST00000575599 KMT2CQ8NEZ4 4911 aaKnown RBP9.68□□□□□ -0.86
RPAIN-216ENST00000575599 H3BMM0 161 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 IGKV3-20P01619 116 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
RPAIN-216ENST00000575599 PYYP10082 97 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 HIST1H1EP10412 219 aaKnown RBP9.68□□□□□ -0.86
RPAIN-216ENST00000575599 HLA-DRB4P13762 266 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 IGFL4Q6B9Z1 124 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 FOXI2Q6ZQN5 318 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 BLNKQ8WV28 456 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 C17orf77Q96MU5 243 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 TMPRSS5Q9H3S3 457 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 SAV1Q9H4B6 383 aaPredicted RBP9.68□□□□□ -0.86
RPAIN-216ENST00000575599 MANBALQ9NQG1 85 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 HLA-DRB4X5D2U9 266 aa9.68□□□□□ -0.86
RPAIN-216ENST00000575599 F6UB75 175 aa9.67□□□□□ -0.86
RPAIN-216ENST00000575599 NBEAP1P0C6P0 100 aa9.67□□□□□ -0.86
RPAIN-216ENST00000575599 TAGLN2P37802 199 aaKnown RBP9.67□□□□□ -0.86
RPAIN-216ENST00000575599 NUTF2P61970 127 aaKnown RBP9.67□□□□□ -0.86
RPAIN-216ENST00000575599 OR4B1Q8NGF8 309 aa9.67□□□□□ -0.86
RPAIN-216ENST00000575599 LYPD6BQ8NI32 183 aa9.67□□□□□ -0.86
RPAIN-216ENST00000575599 IL17DQ8TAD2 202 aa9.67□□□□□ -0.86
RPAIN-216ENST00000575599 EIF5A2Q9GZV4 153 aaKnown RBP9.67□□□□□ -0.86
RPAIN-216ENST00000575599 SNRPCP09234 159 aaKnown RBP9.66□□□□□ -0.86
RPAIN-216ENST00000575599 FXYD7P58549 80 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 UBE2G2P60604 165 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 CCL20P78556 96 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 NDUFA5Q16718 116 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 GUK1Q16774 197 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 CST9LP1Q5W188 147 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 EBLN2Q6P2I7 272 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 RNF182Q8N6D2 247 aa9.66□□□□□ -0.86
RPAIN-216ENST00000575599 A0A087X0K7 114 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 TRAV8-2A0A0B4J237 113 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 RBFOX3A6NFN3 312 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 PMS2P11Q13670 270 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 COMMD7Q86VX2 200 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 FXYD5Q96DB9 178 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 XCL2Q9UBD3 114 aa9.65□□□□□ -0.86
RPAIN-216ENST00000575599 H3BTX0 84 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
RPAIN-216ENST00000575599 DEFB4AO15263 64 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 PAGE4O60829 102 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms