RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ARV1Q9H2C2 271 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 MCUBQ9NWR8 336 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 PXMP4Q9Y6I8 212 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 ANKRD20A5PA0PJZ0 165 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 K7EPK0 472 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 MRPS12O15235 138 aaKnown RBP6.1□□□□□ -1.43
SMG6-218ENST00000575454 RGS5O15539 181 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 C1QBP02746 253 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 TMEM128Q5BJH2 165 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 ZNF431Q8TF32 576 aaPredicted RBP6.1□□□□□ -1.43
SMG6-218ENST00000575454 DEFB104AQ8WTQ1 72 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 ST6GAL2Q96JF0 529 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 NPVFQ9HCQ7 196 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 GSN-AS1Q9NRJ2 163 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 HHLA3Q9XRX5 114 aa6.1□□□□□ -1.43
SMG6-218ENST00000575454 DNAH8Q96JB1 4490 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 FNDC10F2Z333 226 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 PSCAO43653 123 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 SPINK4O60575 86 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 CT45A10P0DMU9 189 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 FAUP35544 74 aaKnown RBP6.09□□□□□ -1.43
SMG6-218ENST00000575454 POLR2GP62487 172 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMG6-218ENST00000575454 IL18Q14116 193 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 GUK1Q16774 197 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 LINC00305Q7Z4B0 112 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 EIF4E3Q8N5X7 224 aaKnown RBP6.09□□□□□ -1.43
SMG6-218ENST00000575454 PARD6GQ9BYG4 376 aaPredicted RBP6.09□□□□□ -1.43
SMG6-218ENST00000575454 MIXL1Q9H2W2 232 aa6.09□□□□□ -1.43
SMG6-218ENST00000575454 RSL24D1Q9UHA3 163 aaKnown RBP6.09□□□□□ -1.43
SMG6-218ENST00000575454 TRAV5A0A0B4J249 113 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 H3BP45 60 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 J3KRW8 73 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 GOSR2O14653 212 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 CRYGDP07320 174 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 VAMP1P23763 118 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 SRIP30626 198 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 CRYBA4P53673 196 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 IBA57Q5T440 356 aaKnown RBP6.08□□□□□ -1.44
SMG6-218ENST00000575454 TEPPQ6URK8 271 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 PATE2Q6UY27 113 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 ZNF546Q86UE3 836 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 C11orf72Q8NBR9 251 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 PCNPQ8WW12 178 aaKnown RBP6.08□□□□□ -1.44
SMG6-218ENST00000575454 DIRAS2Q96HU8 199 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 VGLL1Q99990 258 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 MGAT4CQ9UBM8 478 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 BOLA1Q9Y3E2 137 aa6.08□□□□□ -1.44
SMG6-218ENST00000575454 C7orf71A4D174 169 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 COX7A2P2O60397 106 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 PRAF2O60831 178 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 ORM1P02763 201 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 TCL1AP56279 114 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 HAMPP81172 84 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 ID3Q02535 119 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 CTF1Q16619 201 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 OR10P1Q8NGE3 313 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 MRPL53Q96EL3 112 aaKnown RBP6.07□□□□□ -1.44
SMG6-218ENST00000575454 SLC25A21Q9BQT8 299 aaPredicted RBP6.07□□□□□ -1.44
SMG6-218ENST00000575454 MRPL32Q9BYC8 188 aaKnown RBP6.07□□□□□ -1.44
SMG6-218ENST00000575454 PSENENQ9NZ42 101 aa6.07□□□□□ -1.44
SMG6-218ENST00000575454 LINC00854A0A1B0GVQ3 168 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 KLLNB2CW77 178 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 CTDSP2O14595 271 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 ZNF253O75346 499 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 MPDU1O75352 247 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 IGHV3-53P01767 116 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 NMBP08949 121 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 HOXB5P09067 269 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 IGLC2P0DOY2 106 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 PRB4P10163 310 aaPredicted RBP6.06□□□□□ -1.44
SMG6-218ENST00000575454 AP3S2P59780 193 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 ZNF415Q09FC8 603 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 RAB31Q13636 194 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 FHL2Q14192 279 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 C10orf113Q5VZT2 155 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 SH2D6Q7Z4S9 175 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 IQCF2Q8IXL9 164 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 Q8N814 137 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 SAT2Q96F10 170 aaPredicted RBP6.06□□□□□ -1.44
SMG6-218ENST00000575454 SMIM8Q96KF7 97 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 LINC00477Q96M19 166 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 C8orf49Q96NF6 230 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 TXNDC17Q9BRA2 123 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 GGACTQ9BVM4 153 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 CCDC59Q9P031 241 aaKnown RBP6.06□□□□□ -1.44
SMG6-218ENST00000575454 KLF12Q9Y4X4 402 aa6.06□□□□□ -1.44
SMG6-218ENST00000575454 TRGV4A0A0C4DH28 118 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 LRCOL1A6NCL2 159 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 E5RGE8 158 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 K7EQD1 137 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 SLC17A3O00476 420 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 RGS13O14921 159 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 SFT2D2O95562 160 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 GPX1P07203 203 aa6.05□□□□□ -1.44
SMG6-218ENST00000575454 SNRPCP09234 159 aaKnown RBP6.05□□□□□ -1.44
SMG6-218ENST00000575454 OR4E1P0C645 316 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms