RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
LITAF-217ENST00000575426 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
LITAF-217ENST00000575426 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
LITAF-217ENST00000575426 A0A0J9YWU9 116 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 A8MTW9 85 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 PFDN1O60925 122 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 NDUFB4O95168 129 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 ICAM4Q14773 271 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 AKR1C8PQ5T2L2 129 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 TCTE3Q8IZS6 198 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 MUC7Q8TAX7 377 aa11.08□□□□□ -0.64
LITAF-217ENST00000575426 ACTR3CQ9C0K3 210 aaPredicted RBP11.08□□□□□ -0.64
LITAF-217ENST00000575426 HMGB3O15347 200 aaKnown RBP11.07□□□□□ -0.64
LITAF-217ENST00000575426 EIF5AP63241 154 aaKnown RBP11.07□□□□□ -0.64
LITAF-217ENST00000575426 AKAP14Q86UN6 197 aa11.07□□□□□ -0.64
LITAF-217ENST00000575426 LYPD1Q8N2G4 141 aa11.07□□□□□ -0.64
LITAF-217ENST00000575426 EXOC3-AS1Q8N2X6 119 aa11.07□□□□□ -0.64
LITAF-217ENST00000575426 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
LITAF-217ENST00000575426 CYTL1Q9NRR1 136 aa11.07□□□□□ -0.64
LITAF-217ENST00000575426 GOLT1BQ9Y3E0 138 aa11.07□□□□□ -0.64
LITAF-217ENST00000575426 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 C3orf84H3BNL1 204 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 BOLA2-SMG1P6H3BVE0 249 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 BCL2L11O43521 198 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 EIF3GO75821 320 aaKnown RBP eCLIP11.06□□□□□ -0.64
LITAF-217ENST00000575426 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
LITAF-217ENST00000575426 MIFP14174 115 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 CSN1S1P47710 185 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 RANP62826 216 aaKnown RBP11.06□□□□□ -0.64
LITAF-217ENST00000575426 SPINK13Q1W4C9 94 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 FAM74A1Q5RGS3 127 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 RPP25LQ8N5L8 163 aaKnown RBP11.06□□□□□ -0.64
LITAF-217ENST00000575426 RAB24Q969Q5 203 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 ZNF503Q96F45 646 aa11.06□□□□□ -0.64
LITAF-217ENST00000575426 ZNF471Q9BX82 626 aaPredicted RBP11.06□□□□□ -0.64
LITAF-217ENST00000575426 ZNF705EA8MWA4 302 aaPredicted RBP11.05□□□□□ -0.64
LITAF-217ENST00000575426 PRAC2D3DTV9 90 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 M0R2Z0 102 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 M0R3E3 92 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 STAG3L3P0CL85 134 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 TSPOP30536 169 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 TMUB2Q71RG4 321 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 IGF2BP2-AS1Q96M15 143 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 TMEM208Q9BTX3 173 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 Q9H3A6 140 aa11.05□□□□□ -0.64
LITAF-217ENST00000575426 HUWE1Q7Z6Z7 4374 aaKnown RBP11.05□□□□□ -0.64
LITAF-217ENST00000575426 CXorf1O96002 111 aa11.04□□□□□ -0.64
LITAF-217ENST00000575426 INSP01308 110 aa11.04□□□□□ -0.64
LITAF-217ENST00000575426 C1QBP02746 253 aa11.04□□□□□ -0.64
LITAF-217ENST00000575426 ARL14EPLP0DKL9 152 aa11.04□□□□□ -0.64
LITAF-217ENST00000575426 CTXND1A0A1B0GTU2 59 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 CDKN1BP46527 198 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 IQCF2Q8IXL9 164 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 CMTM2Q8TAZ6 248 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 RXFP4Q8TDU9 374 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 LINC00477Q96M19 166 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
LITAF-217ENST00000575426 X6R8D5 127 aa11.03□□□□□ -0.64
LITAF-217ENST00000575426 IGHV4-28A0A0C4DH34 117 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 PGPA6NDG6 321 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 NPIPB6E9PJ23 425 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 DEFB4AO15263 64 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 TPT1P13693 172 aaKnown RBP11.02□□□□□ -0.65
LITAF-217ENST00000575426 GCHFRP30047 84 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 LEPP41159 167 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 TMEM78Q5T7P6 136 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.65
LITAF-217ENST00000575426 NEU1Q99519 415 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 OTORQ9NRC9 128 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 TMEM167BQ9NRX6 74 aa11.02□□□□□ -0.65
LITAF-217ENST00000575426 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 HBE1P02100 147 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 ERCC8Q13216 396 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 LGALSLQ3ZCW2 172 aaPredicted RBP11.01□□□□□ -0.65
LITAF-217ENST00000575426 ZFAND6Q6FIF0 208 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 BAP18Q8IXM2 172 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 C1orf158Q8N1D5 194 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 TMEM256Q8N2U0 113 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 Q8NAQ8 132 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
LITAF-217ENST00000575426 IGKV2-40A0A087WW87 121 aaPredicted RBP11□□□□□ -0.65
LITAF-217ENST00000575426 UMAD1C9J7I0 102 aa11□□□□□ -0.65
LITAF-217ENST00000575426 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
LITAF-217ENST00000575426 IGKV2D-40P01614 121 aaPredicted RBP11□□□□□ -0.65
LITAF-217ENST00000575426 CT45A10P0DMU9 189 aa11□□□□□ -0.65
LITAF-217ENST00000575426 RRN3P1Q2M238 152 aa11□□□□□ -0.65
LITAF-217ENST00000575426 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
LITAF-217ENST00000575426 C11orf45Q8TAV5 145 aa11□□□□□ -0.65
LITAF-217ENST00000575426 AGPAT4-IT1Q9H0P7 198 aa11□□□□□ -0.65
LITAF-217ENST00000575426 RPH3ALQ9UNE2 315 aa11□□□□□ -0.65
LITAF-217ENST00000575426 TMEM189A5PLL7 270 aa10.99□□□□□ -0.65
LITAF-217ENST00000575426 RBAKDNA6NC62 111 aa10.99□□□□□ -0.65
LITAF-217ENST00000575426 CXorf65A6NEN9 183 aa10.99□□□□□ -0.65
LITAF-217ENST00000575426 J3KRW8 73 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms