RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 IGKCP01834 107 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 RPL27AP46776 148 aaKnown RBP11.35□□□□□ -0.59
SMG6-215ENST00000574501 TMEM200BQ69YZ2 307 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 FOXC2Q99958 501 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 LAMA5O15230 3695 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 PPIFP30405 207 aaKnown RBP11.35□□□□□ -0.59
SMG6-215ENST00000574501 GAGE13Q4V321 117 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 LCNL1Q6ZST4 164 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 MAPKAPK5-AS1Q8N8E1 139 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 TMEM178AQ8NBL3 297 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 RASL11BQ9BPW5 248 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 PLSCR4Q9NRQ2 329 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 TMEM160Q9NX00 188 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 DKK4Q9UBT3 224 aa11.35□□□□□ -0.59
SMG6-215ENST00000574501 LAMTOR5O43504 91 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 FCN3O75636 299 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 EVI2AP22794 236 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 FCER1GP30273 86 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 GATA4P43694 442 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 C12orf74Q32Q52 190 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 C20orf78Q9BR46 151 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 ZMAT4Q9H898 229 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 MSRB1Q9NZV6 116 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 TMEM8BA6NDV4 472 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 PRRG2O14669 202 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 GLRXP35754 106 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 CCL8P80075 99 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 TMEM30BQ3MIR4 351 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 C1orf210Q8IVY1 113 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 PIFOQ8TCI5 191 aa11.34□□□□□ -0.59
SMG6-215ENST00000574501 COL27A1Q8IZC6 1860 aaPredicted RBP11.33□□□□□ -0.6
SMG6-215ENST00000574501 ROS1P08922 2347 aa11.33□□□□□ -0.6
SMG6-215ENST00000574501 PRB3Q04118 309 aaPredicted RBP11.33□□□□□ -0.6
SMG6-215ENST00000574501 FER1L6-AS2Q96M78 137 aa11.33□□□□□ -0.6
SMG6-215ENST00000574501 SCNM1Q9BWG6 230 aa11.33□□□□□ -0.6
SMG6-215ENST00000574501 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
SMG6-215ENST00000574501 PROCRQ9UNN8 238 aa11.33□□□□□ -0.6
SMG6-215ENST00000574501 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
SMG6-215ENST00000574501 PVRIGQ6DKI7 326 aa11.33□□□□□ -0.6
SMG6-215ENST00000574501 DLX1P56177 255 aa11.32□□□□□ -0.6
SMG6-215ENST00000574501 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
SMG6-215ENST00000574501 MRAP2Q96G30 205 aa11.32□□□□□ -0.6
SMG6-215ENST00000574501 MAP1LC3AQ9H492 121 aa11.32□□□□□ -0.6
SMG6-215ENST00000574501 A0A1B0GWB2 263 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 IGKV1-17P01599 117 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
SMG6-215ENST00000574501 GATA1P15976 413 aaPredicted RBP11.31□□□□□ -0.6
SMG6-215ENST00000574501 WT1P19544 449 aaPredicted RBP11.31□□□□□ -0.6
SMG6-215ENST00000574501 KLF17Q5JT82 389 aaPredicted RBP11.31□□□□□ -0.6
SMG6-215ENST00000574501 TMEM164Q5U3C3 297 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 PRO0461Q9UI25 63 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 CACNA1GO43497 2377 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 DPM2O94777 84 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 HIST1H4GQ99525 98 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
SMG6-215ENST00000574501 IGKV2-40A0A087WW87 121 aaPredicted RBP11.3□□□□□ -0.6
SMG6-215ENST00000574501 IGKV2D-40P01614 121 aaPredicted RBP11.3□□□□□ -0.6
SMG6-215ENST00000574501 TMEM158Q8WZ71 300 aa11.3□□□□□ -0.6
SMG6-215ENST00000574501 S4R3C0 116 aa11.3□□□□□ -0.6
SMG6-215ENST00000574501 APOMO95445 188 aa11.3□□□□□ -0.6
SMG6-215ENST00000574501 RNF185Q96GF1 192 aa11.3□□□□□ -0.6
SMG6-215ENST00000574501 GPR179Q6PRD1 2367 aa11.3□□□□□ -0.6
SMG6-215ENST00000574501 H3BRN7 92 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 IGHG3P01860 377 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 TEX36Q5VZQ5 186 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 Q8TAT8 98 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 ZNF502Q8TBZ5 544 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
SMG6-215ENST00000574501 RP1L1Q8IWN7 2480 aaPredicted RBP11.29□□□□□ -0.6
SMG6-215ENST00000574501 TEX22C9J3V5 150 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 I3L2K1 104 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 TNFRSF6BO95407 300 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 IL4P05112 153 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
SMG6-215ENST00000574501 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
SMG6-215ENST00000574501 SHISA9B4DS77 424 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 K7EM74 188 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 MC5RP33032 325 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 MRPL16Q9NX20 251 aaKnown RBP11.28□□□□□ -0.6
SMG6-215ENST00000574501 SIGLEC9Q9Y336 463 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 LYPD2Q6UXB3 125 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
SMG6-215ENST00000574501 VSTM5A8MXK1 200 aa11.27□□□□□ -0.6
SMG6-215ENST00000574501 SRSF1Q07955 248 aaKnown RBP eCLIP11.27□□□□□ -0.6
SMG6-215ENST00000574501 IGFL4Q6B9Z1 124 aa11.27□□□□□ -0.6
SMG6-215ENST00000574501 ZNF491Q8N8L2 437 aa11.27□□□□□ -0.6
SMG6-215ENST00000574501 AAMDCQ9H7C9 122 aa11.27□□□□□ -0.6
SMG6-215ENST00000574501 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.61
SMG6-215ENST00000574501 NDUFA3O95167 84 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 SPINK8P0C7L1 97 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
SMG6-215ENST00000574501 SFTA2Q6UW10 78 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 C8orf86Q6ZUL3 223 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 C22orf34Q6ZV56 151 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms