RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 C18orf32Q8TCD1 76 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 SRSF12Q8WXF0 261 aaKnown RBP12.67□□□□□ -0.38
USP43-204ENST00000573955 TRAV5A0A0B4J249 113 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 GAGE5Q13069 117 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 GAGE6Q13070 117 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 TMEM136Q6ZRR5 245 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 RNF183Q96D59 192 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 A0A1W2PPM0 123 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 TEX22C9J3V5 150 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 SPINK4O60575 86 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 OCC1Q8TAD7 63 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 CITED1Q99966 193 aa12.66□□□□□ -0.38
USP43-204ENST00000573955 HELZ2Q9BYK8 2649 aaKnown RBP12.65□□□□□ -0.38
USP43-204ENST00000573955 TRBV20OR9-2A0A075B6H5 130 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 ODF3BA8MYP8 253 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 SMIM20Q8N5G0 67 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 CFHR4Q92496 578 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 IGKV1D-37A0A075B6S9 117 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 HOXB4P17483 251 aaPredicted RBP12.65□□□□□ -0.38
USP43-204ENST00000573955 COL8A1P27658 744 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 GNG4P50150 75 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 BPIFA4PQ86YQ2 179 aa12.65□□□□□ -0.38
USP43-204ENST00000573955 ANKRD17O75179 2603 aaKnown RBP12.65□□□□□ -0.38
USP43-204ENST00000573955 IGHV4-39P01824 125 aa12.64□□□□□ -0.39
USP43-204ENST00000573955 FABP2P12104 132 aa12.64□□□□□ -0.39
USP43-204ENST00000573955 GPR82Q96P67 336 aa12.64□□□□□ -0.39
USP43-204ENST00000573955 HLA-DQA1P01909 254 aa12.64□□□□□ -0.39
USP43-204ENST00000573955 RPL32P62910 135 aaKnown RBP12.64□□□□□ -0.39
USP43-204ENST00000573955 SRSF1Q07955 248 aaKnown RBP eCLIP12.64□□□□□ -0.39
USP43-204ENST00000573955 ADAMTSL5Q6ZMM2 481 aa12.64□□□□□ -0.39
USP43-204ENST00000573955 ZNF503Q96F45 646 aa12.64□□□□□ -0.39
USP43-204ENST00000573955 NCBP2LA6PVI3 153 aaKnown RBP12.63□□□□□ -0.39
USP43-204ENST00000573955 NBR2O15453 112 aa12.63□□□□□ -0.39
USP43-204ENST00000573955 TECRQ9NZ01 308 aaKnown RBP12.63□□□□□ -0.39
USP43-204ENST00000573955 FBLL1A6NHQ2 334 aaKnown RBP12.63□□□□□ -0.39
USP43-204ENST00000573955 COX7A2P2O60397 106 aa12.63□□□□□ -0.39
USP43-204ENST00000573955 KIR3DS1Q14943 382 aa12.63□□□□□ -0.39
USP43-204ENST00000573955 TMEM191AQ9H0A3 160 aa12.63□□□□□ -0.39
USP43-204ENST00000573955 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 ORM2P19652 201 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 KIR3DL3Q8N743 410 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 RAB37Q96AX2 223 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 MBD6Q96DN6 1003 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 PMCHL2Q9BQD1 86 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 MS4A6AQ9H2W1 248 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 TNFRSF19Q9NS68 423 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 APCSP02743 223 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 LMO4P61968 165 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 CX3CL1P78423 397 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 YAE1D1Q9NRH1 226 aa12.62□□□□□ -0.39
USP43-204ENST00000573955 F11RQ9Y624 299 aaKnown RBP12.62□□□□□ -0.39
USP43-204ENST00000573955 CA1P00915 261 aaPredicted RBP12.61□□□□□ -0.39
USP43-204ENST00000573955 PYYP10082 97 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 ID1P41134 155 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 KLF17Q5JT82 389 aaPredicted RBP12.61□□□□□ -0.39
USP43-204ENST00000573955 RNASEKQ6P5S7 137 aaKnown RBP12.61□□□□□ -0.39
USP43-204ENST00000573955 PATE2Q6UY27 113 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 S4R3C0 116 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 B5MCH6 92 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 OVOL3O00110 214 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 AMY1AP04745 511 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 FXYD3Q14802 87 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 C10orf113Q5VZT2 155 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 C2orf91Q6ZV80 131 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 CCL19Q99731 98 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 ZNF355PQ9NSJ1 428 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 C1RLQ9NZP8 487 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 ABCA2Q9BZC7 2435 aa12.61□□□□□ -0.39
USP43-204ENST00000573955 CRXO43186 299 aaPredicted RBP12.6□□□□□ -0.39
USP43-204ENST00000573955 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
USP43-204ENST00000573955 SLC25A2Q9BXI2 301 aa12.6□□□□□ -0.39
USP43-204ENST00000573955 TAS2R45P59539 299 aa12.6□□□□□ -0.39
USP43-204ENST00000573955 RNF5Q99942 180 aa12.6□□□□□ -0.39
USP43-204ENST00000573955 SPANXB1Q9NS25 103 aaPredicted RBP12.6□□□□□ -0.39
USP43-204ENST00000573955 HSPB8Q9UJY1 196 aa12.6□□□□□ -0.39
USP43-204ENST00000573955 KMT2BQ9UMN6 2715 aaPredicted RBP12.6□□□□□ -0.39
USP43-204ENST00000573955 IGHV3OR16-10A0A075B7F0 116 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 SYS1-DBNDD2H3BUS1 97 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 UBE2L3P68036 154 aaKnown RBP12.59□□□□□ -0.39
USP43-204ENST00000573955 SLC35B1P78383 322 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 PQLC2Q6ZP29 291 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 THAP8Q8NA92 274 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
USP43-204ENST00000573955 K7EN84 100 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 ATP5G2Q06055 141 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 FAM120AOSQ5T036 256 aa12.59□□□□□ -0.39
USP43-204ENST00000573955 HELTA6NFD8 242 aa12.58□□□□□ -0.39
USP43-204ENST00000573955 SPINK8P0C7L1 97 aa12.58□□□□□ -0.39
USP43-204ENST00000573955 LINC00305Q7Z4B0 112 aa12.58□□□□□ -0.39
USP43-204ENST00000573955 FAM167A-AS1Q96KT0 104 aa12.58□□□□□ -0.39
USP43-204ENST00000573955 ANAPC13Q9BS18 74 aa12.58□□□□□ -0.39
USP43-204ENST00000573955 TMEM167BQ9NRX6 74 aa12.58□□□□□ -0.39
USP43-204ENST00000573955 V9GYV3 84 aa12.58□□□□□ -0.39
USP43-204ENST00000573955 NAV2Q8IVL1 2488 aa12.58□□□□□ -0.4
USP43-204ENST00000573955 GGTLC3B5MD39 225 aa12.58□□□□□ -0.4
USP43-204ENST00000573955 COX8AP10176 69 aa12.58□□□□□ -0.4
USP43-204ENST00000573955 C8orf86Q6ZUL3 223 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms