RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PGPEP1LA6NFU8 196 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 CCL24O00175 119 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 FCN3O75636 299 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 CSN3P07498 182 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
SMG6-213ENST00000573166 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
SMG6-213ENST00000573166 LINC01587Q99440 93 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 NRN1Q9NPD7 142 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 OR11H12B2RN74 326 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 ISLRO14498 428 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 HOXD3P31249 432 aaPredicted RBP7.93□□□□□ -1.14
SMG6-213ENST00000573166 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
SMG6-213ENST00000573166 BRWD1-AS2P59051 145 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 DEFB121Q5J5C9 76 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 PARD6GQ9BYG4 376 aaPredicted RBP7.93□□□□□ -1.14
SMG6-213ENST00000573166 IGLV11-55A0A075B6I3 123 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 CLPSL1A2RUU4 121 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 LY6LH3BQJ8 138 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 LINC01548A6NM66 108 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 TEX22C9J3V5 150 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 M0R3E3 92 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 TWIST1Q15672 202 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 FMC1Q96HJ9 113 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 FRYQ5TBA9 3013 aa7.93□□□□□ -1.14
SMG6-213ENST00000573166 K7EIM0 57 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 APCSP02743 223 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 EMP1P54849 157 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 TAS2R60P59551 318 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 RPS20P60866 119 aaKnown RBP7.92□□□□□ -1.14
SMG6-213ENST00000573166 ACTL10Q5JWF8 245 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 PSG8Q9UQ74 426 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
SMG6-213ENST00000573166 MUC21Q5SSG8 566 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 IGKV2-40A0A087WW87 121 aaPredicted RBP7.92□□□□□ -1.14
SMG6-213ENST00000573166 GRIFINA4D1Z8 144 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 C9JCJ5 164 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 IGKV2D-40P01614 121 aaPredicted RBP7.92□□□□□ -1.14
SMG6-213ENST00000573166 DEFB131AP59861 70 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 ARL6IP6Q8N6S5 226 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 HCFC1P51610 2035 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 COL27A1Q8IZC6 1860 aaPredicted RBP7.92□□□□□ -1.14
SMG6-213ENST00000573166 FBLL1A6NHQ2 334 aaKnown RBP7.92□□□□□ -1.14
SMG6-213ENST00000573166 K7ERU9 68 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 C1QL4Q86Z23 238 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 PGLYRP4Q96LB8 373 aa7.92□□□□□ -1.14
SMG6-213ENST00000573166 MRPL27Q9P0M9 148 aaKnown RBP7.91□□□□□ -1.14
SMG6-213ENST00000573166 HLA-DQA1P01909 254 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 FOLR2P14207 255 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 RPL35AP18077 110 aaKnown RBP7.91□□□□□ -1.14
SMG6-213ENST00000573166 SSBP2P81877 361 aaPredicted RBP7.91□□□□□ -1.14
SMG6-213ENST00000573166 ZNF491Q8N8L2 437 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 UBE2E2Q96LR5 201 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 TRAV1-1A0A0B4J248 108 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 FABP5P3A8MUU1 101 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 I3L2K1 104 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 ZNF124Q15973 351 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 THAP8Q8NA92 274 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 ZNF502Q8TBZ5 544 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 AJUBAQ96IF1 538 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 C2CD3Q4AC94 2353 aa7.91□□□□□ -1.14
SMG6-213ENST00000573166 CRYGCP07315 174 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 SLURP1P55000 103 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 SRSF1Q07955 248 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-213ENST00000573166 EBI3Q14213 229 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 LCN12Q6JVE5 192 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 PET117Q6UWS5 81 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 REC114Q7Z4M0 266 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 ZNF114Q8NC26 417 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 POLR3KQ9Y2Y1 108 aaPredicted RBP7.9□□□□□ -1.14
SMG6-213ENST00000573166 IGKV1-17P01599 117 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 FAM74A4Q5TZK3 123 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 TMEM158Q8WZ71 300 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 SFRP2Q96HF1 295 aa7.9□□□□□ -1.14
SMG6-213ENST00000573166 NBEAQ8NFP9 2946 aa7.9□□□□□ -1.15
SMG6-213ENST00000573166 A0A087WWC5 75 aa7.9□□□□□ -1.15
SMG6-213ENST00000573166 SRSF2Q01130 221 aaKnown RBP7.9□□□□□ -1.15
SMG6-213ENST00000573166 FBLN7Q53RD9 439 aa7.9□□□□□ -1.15
SMG6-213ENST00000573166 PRR31Q5SQ13 230 aa7.9□□□□□ -1.15
SMG6-213ENST00000573166 C1orf194Q5T5A4 169 aa7.9□□□□□ -1.15
SMG6-213ENST00000573166 TMEM183AQ8IXX5 376 aa7.9□□□□□ -1.15
SMG6-213ENST00000573166 CITED2Q99967 270 aaPredicted RBP7.9□□□□□ -1.15
SMG6-213ENST00000573166 M0R381 172 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 PRSS1P07477 247 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 ASIPP42127 132 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 ASCL2Q99929 193 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 HSPB8Q9UJY1 196 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 ZFP30Q9Y2G7 519 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 DMXL2Q8TDJ6 3036 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 TRAV8-1A0A0A6YYK1 113 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 MUC21A0A0G2JKD1 596 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 IGHV7-4-1A0A0J9YVY3 117 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 MUC21A0A140T8X8 626 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 TCRAP04437 139 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 CTSGP08311 255 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 LEPP41159 167 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 PSG3Q16557 428 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 MRPL18Q9H0U6 180 aaKnown RBP7.89□□□□□ -1.15
SMG6-213ENST00000573166 TANC2Q9HCD6 1990 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms