RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 C11orf68Q9H3H3 251 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-207ENST00000572346 HRH4Q9H3N8 390 aa10.8□□□□□ -0.68
NPLOC4-207ENST00000572346 H3BQ15 152 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 SOCS3O14543 225 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 HMGB3O15347 200 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 OR10J4P0C629 311 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 UBE2L3P68036 154 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 PQLC2Q6ZP29 291 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 RNF141Q8WVD5 230 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 RAB24Q969Q5 203 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 ZNF586Q9NXT0 402 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 DNAH10Q8IVF4 4471 aa10.79□□□□□ -0.68
NPLOC4-207ENST00000572346 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
NPLOC4-207ENST00000572346 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
NPLOC4-207ENST00000572346 NBEAP1P0C6P0 100 aa10.78□□□□□ -0.68
NPLOC4-207ENST00000572346 IGFL4Q6B9Z1 124 aa10.78□□□□□ -0.68
NPLOC4-207ENST00000572346 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
NPLOC4-207ENST00000572346 HERC2O95714 4834 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 CA1P00915 261 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 PSG9Q00887 426 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 ACTL10Q5JWF8 245 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 STHQ8IWL8 128 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 IQCF2Q8IXL9 164 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 ZNF331Q9NQX6 463 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 CLEC5AQ9NY25 188 aa10.77□□□□□ -0.69
NPLOC4-207ENST00000572346 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 KNCNA6PVL3 124 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 DEFB4AO15263 64 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 ZNF253O75346 499 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 CXorf1O96002 111 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 STAG3L2P0CL84 134 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 STAG3L3P0CL85 134 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 ARL14EPLP0DKL9 152 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 PDE6HQ13956 83 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 PSG3Q16557 428 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 EBLN2Q6P2I7 272 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 FAM213BQ8TBF2 198 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 FXYD5Q96DB9 178 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 AAMDCQ9H7C9 122 aa10.76□□□□□ -0.69
NPLOC4-207ENST00000572346 SLC17A3O00476 420 aa10.75□□□□□ -0.69
NPLOC4-207ENST00000572346 HLA-DMBP28068 263 aa10.75□□□□□ -0.69
NPLOC4-207ENST00000572346 C2CD4CQ8TF44 421 aa10.75□□□□□ -0.69
NPLOC4-207ENST00000572346 SAT2Q96F10 170 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-207ENST00000572346 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
NPLOC4-207ENST00000572346 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
NPLOC4-207ENST00000572346 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
NPLOC4-207ENST00000572346 MAP1LC3B2A6NCE7 125 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 BOLA2-SMG1P6H3BVE0 249 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 GCHFRP30047 84 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 RAB5CP51148 216 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 TCTAP57738 103 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 RANP62826 216 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 DPPA3Q6W0C5 159 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 FOXI2Q6ZQN5 318 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 MAP1LC3BQ9GZQ8 125 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 TMEM167BQ9NRX6 74 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
NPLOC4-207ENST00000572346 VPS13DQ5THJ4 4388 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 NDUFB4O95168 129 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 FGF8P55075 233 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 DEFB1P60022 68 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 ICAM4Q14773 271 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 SSX7Q7RTT5 188 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 Q8NAQ8 132 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 OR4B1Q8NGF8 309 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 SAV1Q9H4B6 383 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 APLNQ9ULZ1 77 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 PRELID1Q9Y255 219 aa10.73□□□□□ -0.69
NPLOC4-207ENST00000572346 F6UB75 175 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 DUSP14O95147 198 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 HLA-DRB4P13762 266 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 FHITP49789 147 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 SFT2D1Q8WV19 159 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 PHYHIPLQ96FC7 376 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
NPLOC4-207ENST00000572346 ZNF705FA8MVS1 300 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 IGLL5B9A064 214 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 C11orf94C9JXX5 98 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 H3BMM0 161 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 IGKV3-20P01619 116 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 H2AFB1P0C5Y9 115 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 CSN1S1P47710 185 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 SULT1A2P50226 295 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 GDF5OSQ5U4N7 250 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 CMTM2Q8TAZ6 248 aa10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 MRPL53Q96EL3 112 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-207ENST00000572346 Q9H3A6 140 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms