RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ATP5SQ99766 215 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 SLC50A1Q9BRV3 221 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 SLC25A2Q9BXI2 301 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 MED28Q9H204 178 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 M0R3E3 92 aa7.33□□□□□ -1.24
GTF3C1-213ENST00000571886 EMP1P54849 157 aa7.33□□□□□ -1.24
GTF3C1-213ENST00000571886 RHOBP62745 196 aa7.33□□□□□ -1.24
GTF3C1-213ENST00000571886 RNF24Q9Y225 148 aa7.33□□□□□ -1.24
GTF3C1-213ENST00000571886 TRBV19A0A075B6N1 114 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 SMIM9A6NGZ8 99 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 ZNF705GA8MUZ8 300 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 JTBO76095 146 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 PET100P0DJ07 73 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 HIST1H1EP10412 219 aaKnown RBP7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 AZU1P20160 251 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 EXOC3-AS1Q8N2X6 119 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 BLNKQ8WV28 456 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 LINC00476Q8WZB0 136 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 ZNF503Q96F45 646 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 HYLS1Q96M11 299 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 TMEM14CQ9P0S9 112 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 KLK5Q9Y337 293 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 GOLT1BQ9Y3E0 138 aa7.32□□□□□ -1.24
GTF3C1-213ENST00000571886 LY6G6CO95867 125 aa7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 CT45A10P0DMU9 189 aa7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 ERCC8Q13216 396 aa7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 GUK1Q16774 197 aa7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 FFAR4Q5NUL3 377 aa7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 RPP25LQ8N5L8 163 aaKnown RBP7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 OR51M1Q9H341 326 aa7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 APLNQ9ULZ1 77 aa7.31□□□□□ -1.24
GTF3C1-213ENST00000571886 LOC102723971A0A1B0GUV8 181 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 PLAC8L1A1L4L8 177 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 IGLL5B9A064 214 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 C17orf112F2Z3M2 114 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 G3V3Q6 166 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 ZNF253O75346 499 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 IFNA5P01569 189 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 HBE1P02100 147 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 AMBPP02760 352 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 OR10J4P0C629 311 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 NKX2-5P52952 324 aaPredicted RBP7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 RRN3P1Q2M238 152 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 FAM222AQ5U5X8 452 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 SCGB1C1Q8TD33 95 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 C2CD4CQ8TF44 421 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 FXYD5Q96DB9 178 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 DKK2Q9UBU2 259 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 FUT9Q9Y231 359 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 YTHDF2Q9Y5A9 579 aaKnown RBP7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 TIMM9Q9Y5J7 89 aa7.3□□□□□ -1.24
GTF3C1-213ENST00000571886 TRAV10A0A0B4J240 114 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 J3KRW8 73 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 INSP01308 110 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 GIPP09681 153 aaPredicted RBP7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 NBEAP1P0C6P0 100 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 CDKN1BP46527 198 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 ICAM4Q14773 271 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 OR10J6PQ8NGY7 276 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 RNF141Q8WVD5 230 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 PHYHIPLQ96FC7 376 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 AQP10Q96PS8 301 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 LINC01587Q99440 93 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 TMEM208Q9BTX3 173 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 PAXXQ9BUH6 204 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 MRPL32Q9BYC8 188 aaKnown RBP7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 AGPAT4-IT1Q9H0P7 198 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 PPP1R14DQ9NXH3 145 aa7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 EPPK1P58107 5090 aaKnown RBP7.29□□□□□ -1.24
GTF3C1-213ENST00000571886 DEFB131BA0A096LNP1 70 aa7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 RNF222A6NCQ9 220 aa7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 C11orf94C9JXX5 98 aa7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 NPIPB6E9PJ23 425 aa7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 RAB2AP61019 212 aa7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 GFI1BQ5VTD9 330 aa7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 FAM122CQ6P4D5 195 aa7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 MRPL53Q96EL3 112 aaKnown RBP7.28□□□□□ -1.24
GTF3C1-213ENST00000571886 IGHV4-4A0A075B6R2 117 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 IGKV2-40A0A087WW87 121 aaPredicted RBP7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 TMEM189A5PLL7 270 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 SMLR1H3BR10 107 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 HMGB3O15347 200 aaKnown RBP7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 IGKV2D-40P01614 121 aaPredicted RBP7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 HTN1P15515 57 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 PDE6HQ13956 83 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 Q6ZQT7 251 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 HSD17B11Q8NBQ5 300 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 FAM19A4Q96LR4 140 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 VGLL1Q99990 258 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 NIPSNAP3BQ9BS92 247 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 KCNIP2Q9NS61 270 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 PRELID1Q9Y255 219 aa7.27□□□□□ -1.25
GTF3C1-213ENST00000571886 FXYD6-FXYD2A0A087WZ82 144 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 TRAV12-3A0A0B4J271 114 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 OR7C2O60412 319 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 M6PRP20645 277 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 ATP6V0CP27449 155 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 TAS2R60P59551 318 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 RANP62826 216 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms