RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 GAGE7O76087 117 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 SPATA12Q7Z6I5 190 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 ZBTB8BQ8NAP8 495 aaPredicted RBP10.78□□□□□ -0.68
TSR1-202ENST00000571806 OR1L4Q8NGR5 311 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 MITD1Q8WV92 249 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 SAT2Q96F10 170 aaPredicted RBP10.78□□□□□ -0.68
TSR1-202ENST00000571806 FLVCR2Q9UPI3 526 aa10.78□□□□□ -0.68
TSR1-202ENST00000571806 MRPS16Q9Y3D3 137 aaKnown RBP10.78□□□□□ -0.68
TSR1-202ENST00000571806 A0A0J9YY99 117 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 L7N2F9 121 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 ZNF253O75346 499 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 HOXA5P20719 270 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 CAMLGP49069 296 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 VAMP2P63027 116 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 KIR3DS1Q14943 382 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 OPCMLQ14982 345 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 ESRGQ1W209 222 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 C12orf45Q8N5I9 185 aaPredicted RBP10.77□□□□□ -0.69
TSR1-202ENST00000571806 ZNF680Q8NEM1 530 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 C18orf15Q96N68 181 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 PFDN5Q99471 154 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 MGST2Q99735 147 aa10.77□□□□□ -0.69
TSR1-202ENST00000571806 RCL1Q9Y2P8 373 aaKnown RBP10.77□□□□□ -0.69
TSR1-202ENST00000571806 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
TSR1-202ENST00000571806 NPIPB6E9PJ23 425 aa10.76□□□□□ -0.69
TSR1-202ENST00000571806 SLC17A3O00476 420 aa10.76□□□□□ -0.69
TSR1-202ENST00000571806 MBPP02686 304 aaPredicted RBP10.76□□□□□ -0.69
TSR1-202ENST00000571806 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
TSR1-202ENST00000571806 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
TSR1-202ENST00000571806 ARL16Q0P5N6 197 aa10.76□□□□□ -0.69
TSR1-202ENST00000571806 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
TSR1-202ENST00000571806 BAK1Q16611 211 aa10.76□□□□□ -0.69
TSR1-202ENST00000571806 ZNF431Q8TF32 576 aaPredicted RBP10.76□□□□□ -0.69
TSR1-202ENST00000571806 MRPL53Q96EL3 112 aaKnown RBP10.76□□□□□ -0.69
TSR1-202ENST00000571806 HSPG2P98160 4391 aa10.75□□□□□ -0.69
TSR1-202ENST00000571806 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
TSR1-202ENST00000571806 H3BQ15 152 aa10.75□□□□□ -0.69
TSR1-202ENST00000571806 SNRPCP09234 159 aaKnown RBP10.75□□□□□ -0.69
TSR1-202ENST00000571806 NRARPQ7Z6K4 114 aa10.75□□□□□ -0.69
TSR1-202ENST00000571806 C20orf85Q9H1P6 137 aa10.75□□□□□ -0.69
TSR1-202ENST00000571806 TRGV2A0A075B6R0 118 aa10.74□□□□□ -0.69
TSR1-202ENST00000571806 PRB4P10163 310 aaPredicted RBP10.74□□□□□ -0.69
TSR1-202ENST00000571806 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
TSR1-202ENST00000571806 LINC00477Q96M19 166 aa10.74□□□□□ -0.69
TSR1-202ENST00000571806 LINC00467Q9BRT7 94 aa10.74□□□□□ -0.69
TSR1-202ENST00000571806 PARD6GQ9BYG4 376 aaPredicted RBP10.74□□□□□ -0.69
TSR1-202ENST00000571806 KRTAP1-5Q9BYS1 174 aa10.74□□□□□ -0.69
TSR1-202ENST00000571806 SCRT2Q9NQ03 307 aa10.74□□□□□ -0.69
TSR1-202ENST00000571806 PRELID1Q9Y255 219 aa10.74□□□□□ -0.69
TSR1-202ENST00000571806 H3BTX0 84 aa10.73□□□□□ -0.69
TSR1-202ENST00000571806 J3KRW8 73 aa10.73□□□□□ -0.69
TSR1-202ENST00000571806 PVALBP20472 110 aaPredicted RBP10.73□□□□□ -0.69
TSR1-202ENST00000571806 RPL29P47914 159 aaKnown RBP10.73□□□□□ -0.69
TSR1-202ENST00000571806 BCAP31P51572 246 aa10.73□□□□□ -0.69
TSR1-202ENST00000571806 CAV2P51636 162 aa10.73□□□□□ -0.69
TSR1-202ENST00000571806 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
TSR1-202ENST00000571806 TMPRSS5Q9H3S3 457 aa10.73□□□□□ -0.69
TSR1-202ENST00000571806 UQCC1Q9NVA1 299 aa10.73□□□□□ -0.69
TSR1-202ENST00000571806 C7orf71A4D174 169 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 S100A11P31949 105 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 BTCP35070 178 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 PDE6HQ13956 83 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 VWC2Q2TAL6 325 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 Q6ZTI0 123 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 CHAC2Q8WUX2 184 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 TMEM14CQ9P0S9 112 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 WDR83OSQ9Y284 106 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 LRP1BQ9NZR2 4599 aa10.72□□□□□ -0.69
TSR1-202ENST00000571806 TRBV19A0A075B6N1 114 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 A0A096LPF7 62 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 LINC00854A0A1B0GVQ3 168 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 KLLNB2CW77 178 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 EREGO14944 169 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 SIVA1O15304 175 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 NMBP08949 121 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 HBG1P69891 147 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 HBG2P69892 147 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 SLAQ13239 276 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 MIC13Q5XKP0 118 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 EIF4E3Q8N5X7 224 aaKnown RBP10.71□□□□□ -0.69
TSR1-202ENST00000571806 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 RBM38Q9H0Z9 239 aaKnown RBP10.71□□□□□ -0.69
TSR1-202ENST00000571806 GSN-AS1Q9NRJ2 163 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 SLC39A9Q9NUM3 307 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 PTTG2Q9NZH5 202 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 FUT9Q9Y231 359 aa10.71□□□□□ -0.69
TSR1-202ENST00000571806 LSM5Q9Y4Y9 91 aaKnown RBP10.71□□□□□ -0.69
TSR1-202ENST00000571806 TRAV5A0A0B4J249 113 aa10.7□□□□□ -0.7
TSR1-202ENST00000571806 ZNF324O75467 553 aaPredicted RBP10.7□□□□□ -0.7
TSR1-202ENST00000571806 HIST1H1EP10412 219 aaKnown RBP10.7□□□□□ -0.7
TSR1-202ENST00000571806 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
TSR1-202ENST00000571806 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
TSR1-202ENST00000571806 C11orf72Q8NBR9 251 aa10.7□□□□□ -0.7
TSR1-202ENST00000571806 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms