RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 CBY3A6NI87 242 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 CST7O76096 145 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 RLN2P04090 185 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 IGLC2P0DOY2 106 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 LEPP41159 167 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 ARL16Q0P5N6 197 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 ASAH1Q13510 395 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 PDE6HQ13956 83 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 OPCMLQ14982 345 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 ENKURQ8TC29 256 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 SEC22CQ9BRL7 303 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 SLC39A9Q9NUM3 307 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 PRELID1Q9Y255 219 aa6.9□□□□□ -1.3
CIITA-207ENST00000571545 KMT2AQ03164 3969 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 F5H768 121 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 PRAF2O60831 178 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 HTN1P15515 57 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 FGF7P21781 194 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 CYCSP99999 105 aaKnown RBP6.89□□□□□ -1.31
CIITA-207ENST00000571545 TNP2Q05952 138 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 RAB32Q13637 225 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 TMEM252Q8N6L7 170 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
CIITA-207ENST00000571545 SLC25A31Q9H0C2 315 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 AAMDCQ9H7C9 122 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 TMEM14CQ9P0S9 112 aa6.89□□□□□ -1.31
CIITA-207ENST00000571545 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 FAM24AA6NFZ4 105 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 SNURFLB1AK76 121 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 PET100P0DJ07 73 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 CCL18P55774 89 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 MIC13Q5XKP0 118 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 C11orf1Q9H5F2 150 aa6.88□□□□□ -1.31
CIITA-207ENST00000571545 IGLV2-18A0A075B6J9 118 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 E5RGE8 158 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 M0R2N4 97 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 SLC17A3O00476 420 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 SLC25A5P05141 298 aaKnown RBP6.87□□□□□ -1.31
CIITA-207ENST00000571545 IL15RAQ13261 267 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 CLINT1Q14677 625 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 C1orf134Q5TEV5 83 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 Q6ZR54 194 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 ZNF680Q8NEM1 530 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 SAT2Q96F10 170 aaPredicted RBP6.87□□□□□ -1.31
CIITA-207ENST00000571545 ZNF503Q96F45 646 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 NPCDR1Q9BY65 106 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 NMES1Q9C002 83 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 NOP10Q9NPE3 64 aaKnown RBP6.87□□□□□ -1.31
CIITA-207ENST00000571545 TIMM9Q9Y5J7 89 aa6.87□□□□□ -1.31
CIITA-207ENST00000571545 NACAE9PAV3 2078 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 IGSF23A1L1A6 192 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 H3BQ15 152 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 NUDT3O95989 172 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 NMBP08949 121 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 HIST1H1EP10412 219 aaKnown RBP6.86□□□□□ -1.31
CIITA-207ENST00000571545 AZU1P20160 251 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 GFI1BQ5VTD9 330 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 MORN5Q5VZ52 161 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
CIITA-207ENST00000571545 MRPL32Q9BYC8 188 aaKnown RBP6.86□□□□□ -1.31
CIITA-207ENST00000571545 H3BNG1 76 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 RTL8CO15255 209 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 UPK1BO75841 260 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 MED14OSP0DP75 135 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 M6PRP20645 277 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 DEFA1P59665 94 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 DEFA3P59666 94 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 DAZ2Q13117 558 aaKnown RBP6.85□□□□□ -1.31
CIITA-207ENST00000571545 TTC32Q5I0X7 151 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 TMEM78Q5T7P6 136 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 OR5C1Q8NGR4 320 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 GNPNAT1Q96EK6 184 aaPredicted RBP6.85□□□□□ -1.31
CIITA-207ENST00000571545 ZNF586Q9NXT0 402 aa6.85□□□□□ -1.31
CIITA-207ENST00000571545 TRBV7-9A0A0J9YWB2 115 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 C7orf71A4D174 169 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 H3BTX0 84 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 SNRPCP09234 159 aaKnown RBP6.84□□□□□ -1.31
CIITA-207ENST00000571545 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 RXFP4Q8TDU9 374 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 LINC00467Q9BRT7 94 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 PTTG2Q9NZH5 202 aa6.84□□□□□ -1.31
CIITA-207ENST00000571545 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 TRAV5A0A0B4J249 113 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 TRAV12-3A0A0B4J271 114 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 NBDYA0A0U1RRE5 68 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 KLLNB2CW77 178 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 PRAC2D3DTV9 90 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 PRM2P04554 102 aa6.83□□□□□ -1.32
CIITA-207ENST00000571545 BTF3P20290 206 aaKnown RBP6.83□□□□□ -1.32
CIITA-207ENST00000571545 CSN1S1P47710 185 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms