RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MBD3L1Q8WWY6 194 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 TMEM18Q96B42 140 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 TMEM147Q9BVK8 224 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 WDR61Q9GZS3 305 aaKnown RBP4.88□□□□□ -1.63
CHD3-213ENST00000571249 SH3BGRL3Q9H299 93 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 PRNDQ9UKY0 176 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 TRAV3A0A0B4J244 114 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 OR4C46A6NHA9 309 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 FAM223BA6NKX1 122 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 C15orf62A8K5M9 175 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 CEBPZOSA8MTT3 80 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 H3BP45 60 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 H7C2Y5 167 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 NDUFS6O75380 124 aaKnown RBP4.87□□□□□ -1.63
CHD3-213ENST00000571249 KBTBD11O94819 623 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 CRYZL1O95825 349 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 APOA2P02652 100 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 C8orf88P0DMB2 117 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 BSXQ3C1V8 233 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 FAM223AQ8IWN6 122 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 OR10P1Q8NGE3 313 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 ZNRF2Q8NHG8 242 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 TMEM167AQ8TBQ9 72 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 SCGB1C1Q8TD33 95 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 FAM210BQ96KR6 192 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 SEC11CQ9BY50 192 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 VCX2Q9H322 139 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 UQCC1Q9NVA1 299 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 FKBP11Q9NYL4 201 aa4.87□□□□□ -1.63
CHD3-213ENST00000571249 MRPL27Q9P0M9 148 aaKnown RBP4.87□□□□□ -1.63
CHD3-213ENST00000571249 A0A087X0K7 114 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 SRRM4A7MD48 611 aaKnown RBP4.86□□□□□ -1.63
CHD3-213ENST00000571249 MPDU1O75352 247 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 IGLV2-23P01705 113 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 IGHV3-23P01764 117 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 HBE1P02100 147 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 IGKV1-16P04430 117 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 TAGLN2P37802 199 aaKnown RBP4.86□□□□□ -1.63
CHD3-213ENST00000571249 FHITP49789 147 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 ELLP55199 621 aaPredicted RBP4.86□□□□□ -1.63
CHD3-213ENST00000571249 PRCDQ00LT1 54 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 TMEM41BQ5BJD5 291 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 AKR1C8PQ5T2L2 129 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 UNQ9165/PRO28630Q6UXU0 137 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 VSTM2AQ8TAG5 236 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 GRAMD2BQ96HH9 432 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 RNF5Q99942 180 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 RPRMQ9NS64 109 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 WDR83OSQ9Y284 106 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 WASHC3Q9Y3C0 194 aa4.86□□□□□ -1.63
CHD3-213ENST00000571249 TRBV9A0A0B4J1U6 114 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 OR2J3O76001 311 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 MBP02144 154 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 CRYGBP07316 175 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 SAA1P0DJI8 122 aaPredicted RBP4.85□□□□□ -1.63
CHD3-213ENST00000571249 ADCYAP1P18509 176 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 OR2B8PP59922 312 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 PEA15Q15121 130 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 GUK1Q16774 197 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 C15orf32Q32M92 178 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 C2orf83Q53S99 150 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 CLEC19AQ6UXS0 136 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 SSX9Q7RTT3 188 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 VKORC1L1Q8N0U8 176 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 SVBPQ8N300 66 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 TEX45Q8NA69 505 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 NECAP1Q8NC96 275 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 OR10G4Q8NGN3 311 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 FAM213BQ8TBF2 198 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 PBDC1Q9BVG4 233 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 KRTAP1-5Q9BYS1 174 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 NDUFA4L2Q9NRX3 87 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 RFNGQ9Y644 331 aa4.85□□□□□ -1.63
CHD3-213ENST00000571249 RBFOX3A6NFN3 312 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 C9JQL5 133 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 K7EQM0 130 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 APOC3P02656 99 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 MT1HL1P0DM35 61 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 MAS1LP35410 378 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 TFPI2P48307 235 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 CMC4P56277 68 aaPredicted RBP4.84□□□□□ -1.63
CHD3-213ENST00000571249 RAB2AP61019 212 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 RAB11AP62491 216 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 RPL8P62917 257 aaKnown RBP4.84□□□□□ -1.63
CHD3-213ENST00000571249 ZNF726P1Q15940 193 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 VMA21Q3ZAQ7 101 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 KHDC3LQ587J8 217 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 ZNF506Q5JVG8 444 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 OR8G2PQ6IF36 304 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 CD164L2Q6UWJ8 174 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 OR1L8Q8NGR8 309 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 RSG1Q9BU20 258 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 NPCDR1Q9BY65 106 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 TREM1Q9NP99 234 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 GSN-AS1Q9NRJ2 163 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 UFC1Q9Y3C8 167 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 OR51B2Q9Y5P1 312 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 S4R3C0 116 aa4.84□□□□□ -1.63
CHD3-213ENST00000571249 CTXND1A0A1B0GTU2 59 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms