RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 MBD3L3A6NE82 208 aaPredicted RBP10.88□□□□□ -0.67
TRPV1-206ENST00000571088 MBD3L5A6NJ08 208 aaPredicted RBP10.88□□□□□ -0.67
TRPV1-206ENST00000571088 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
TRPV1-206ENST00000571088 MBD3L2Q8NHZ7 208 aaPredicted RBP10.88□□□□□ -0.67
TRPV1-206ENST00000571088 LINC01545Q5VT33 79 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 TMEM200BQ69YZ2 307 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 DUX4L9Q6RFH8 374 aaPredicted RBP10.87□□□□□ -0.67
TRPV1-206ENST00000571088 NPFFR1Q9GZQ6 430 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 DYSFO75923 2080 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 MRPL51Q4U2R6 128 aaKnown RBP10.87□□□□□ -0.67
TRPV1-206ENST00000571088 IGF2BP2-AS1Q96M15 143 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 DPM3Q9P2X0 92 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 COL4A2P08572 1712 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
TRPV1-206ENST00000571088 PAX1P15863 534 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 C17orf58Q2M2W7 97 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 LINC01559Q495D7 138 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 C5orf42Q9H799 3197 aa10.87□□□□□ -0.67
TRPV1-206ENST00000571088 IGKV1OR2-108A0A075B7D4 117 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 TNFRSF6BO95407 300 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 MRAP2Q96G30 205 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 NPIPB6E9PJ23 425 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 TSPAN13O95857 204 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 NPYP01303 97 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 POU2AF1Q16633 256 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 ZNF562Q6V9R5 426 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 FAM57AQ8TBR7 257 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 SPRY4Q9C004 299 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 FAM120AOSQ5T036 256 aa10.86□□□□□ -0.67
TRPV1-206ENST00000571088 PLNP26678 52 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 LINC00310P59036 64 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 BSPH1Q075Z2 132 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 GATA4P43694 442 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 Q8TCH9 128 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 TTC28Q96AY4 2481 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 ASIPP42127 132 aa10.85□□□□□ -0.67
TRPV1-206ENST00000571088 ZNF474Q6S9Z5 364 aaPredicted RBP10.85□□□□□ -0.67
TRPV1-206ENST00000571088 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 G3V4G9 280 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 NDUFS7O75251 213 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 TTTY13Q9BZ97 58 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 SIVA1O15304 175 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 C10orf126Q8N4M7 172 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 SIGLEC9Q9Y336 463 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 KIAA1549Q9HCM3 1950 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 NBR2O15453 112 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 BRWD1-AS2P59051 145 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 WFDC2Q14508 124 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 ZNF56Q15929 161 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 SPATA12Q7Z6I5 190 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 FAM167A-AS1Q96KT0 104 aa10.84□□□□□ -0.67
TRPV1-206ENST00000571088 MRPL35Q9NZE8 188 aaKnown RBP10.84□□□□□ -0.67
TRPV1-206ENST00000571088 H7C1H1 209 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 K7EMI3 77 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 TIMM23O14925 209 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 FAM106CPP0CH98 169 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 NEU4Q8WWR8 484 aaPredicted RBP10.83□□□□□ -0.68
TRPV1-206ENST00000571088 LINC01549A6NIU2 74 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 LTAP01374 205 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 KHDC1LQ5JSQ8 128 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 GDF5OSQ5U4N7 250 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 SRSF6Q13247 344 aaKnown RBP10.83□□□□□ -0.68
TRPV1-206ENST00000571088 ADIPOQQ15848 244 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 SHANK2-AS3Q9BTD1 123 aa10.83□□□□□ -0.68
TRPV1-206ENST00000571088 TRBV19A0A075B6N1 114 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 PPP1R17O96001 155 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 TPSG1Q9NRR2 321 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 NAV3Q8IVL0 2385 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 FXYD2P54710 66 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 FAM159AQ6UWV7 190 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 C1orf122Q6ZSJ8 110 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 CEND1Q8N111 149 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 TNRC6AQ8NDV7 1962 aaKnown RBP10.82□□□□□ -0.68
TRPV1-206ENST00000571088 PRSS46E5RG02 174 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 PATE2Q6UY27 113 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 SPG11Q96JI7 2443 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 B9A039 149 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 LYNX1G3V0Z9 82 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 IGLV2-8P01709 118 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 LYNX1P0DP58 116 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 ERG28Q9UKR5 140 aa10.82□□□□□ -0.68
TRPV1-206ENST00000571088 IGHV1-8P0DP01 117 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 ZNF503Q96F45 646 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 HCFC1P51610 2035 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 IGHV3-64A0A075B6Q5 118 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 TMEM75Q8N9X5 138 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 IGLV3-9A0A075B6K5 115 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 TRBV25-1A0A075B6N4 114 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 C9JAW5 83 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 APOBEC3AP31941 199 aaPredicted RBP10.81□□□□□ -0.68
TRPV1-206ENST00000571088 C12orf74Q32Q52 190 aa10.81□□□□□ -0.68
TRPV1-206ENST00000571088 DDB2Q92466 427 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms