RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	RXFP4	Q8TDU9	374 aa		13.06	□□□□□ -0.32
PKD1-238	ENST00000570150	IGHV4-28	A0A0C4DH34	117 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	LEP	P41159	167 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	TCTA	P57738	103 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	UBE2L3	P68036	154 aa	Known RBP	13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	ZNF345	Q14585	488 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	RRN3P1	Q2M238	152 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	GCSAML	Q5JQS6	135 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	IGFL4	Q6B9Z1	124 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	AMTN	Q6UX39	209 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	OR10G4	Q8NGN3	311 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	OR10G9	Q8NGN4	311 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	OR10G7	Q8NGN6	311 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	FAM167A-AS1	Q96KT0	104 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	LINC00477	Q96M19	166 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	SLC35B3	Q9H1N7	401 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150		X6R8D5	127 aa		13.05	□□□□□ -0.32
PKD1-238	ENST00000570150	SLC17A3	O00476	420 aa		13.04	□□□□□ -0.32
PKD1-238	ENST00000570150	EIF5A	P63241	154 aa	Known RBP	13.04	□□□□□ -0.32
PKD1-238	ENST00000570150	HSD17B11	Q8NBQ5	300 aa		13.04	□□□□□ -0.32
PKD1-238	ENST00000570150	BLNK	Q8WV28	456 aa		13.04	□□□□□ -0.32
PKD1-238	ENST00000570150	WFDC1	Q9HC57	220 aa		13.04	□□□□□ -0.32
PKD1-238	ENST00000570150	TRBV7-9	A0A0J9YWB2	115 aa		13.03	□□□□□ -0.32
PKD1-238	ENST00000570150	HMSD	A8MTL9	139 aa		13.03	□□□□□ -0.32
PKD1-238	ENST00000570150	NMB	P08949	121 aa		13.03	□□□□□ -0.32
PKD1-238	ENST00000570150	PYY	P10082	97 aa		13.03	□□□□□ -0.32
PKD1-238	ENST00000570150	ZFAND6	Q6FIF0	208 aa		13.03	□□□□□ -0.32
PKD1-238	ENST00000570150		A0A0D9SG52	128 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	RNF222	A6NCQ9	220 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	NPIPB6	E9PJ23	425 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	ARPC5	O15511	151 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	SLC25A5	P05141	298 aa	Known RBP	13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	SPART-AS1	P0CW21	52 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	CDC34	P49427	236 aa	Predicted RBP	13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	SPINK13	Q1W4C9	94 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	TMEM78	Q5T7P6	136 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	FXYD5	Q96DB9	178 aa		13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.02	□□□□□ -0.33
PKD1-238	ENST00000570150	IGHV3OR16-12	A0A075B7B8	117 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150	RBAKDN	A6NC62	111 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150		H7BYZ3	331 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150	NDUFB4	O95168	129 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150	ATP6V0C	P27449	155 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150	FXYD7	P58549	80 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150	DEFB1	P60022	68 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150	ICAM4	Q14773	271 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150		Q5BKY6	102 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150	CMTM2	Q8TAZ6	248 aa		13.01	□□□□□ -0.33
PKD1-238	ENST00000570150		H3BTX0	84 aa		13	□□□□□ -0.33
PKD1-238	ENST00000570150	OR10J4	P0C629	311 aa		13	□□□□□ -0.33
PKD1-238	ENST00000570150	HLA-DMB	P28068	263 aa		13	□□□□□ -0.33
PKD1-238	ENST00000570150	TAS2R60	P59551	318 aa		13	□□□□□ -0.33
PKD1-238	ENST00000570150	ZNF493	Q6ZR52	646 aa		13	□□□□□ -0.33
PKD1-238	ENST00000570150	ARPC5L	Q9BPX5	153 aa		13	□□□□□ -0.33
PKD1-238	ENST00000570150	TMEM167B	Q9NRX6	74 aa		13	□□□□□ -0.33
PKD1-238	ENST00000570150	SERTM2	A0A1B0GWG4	89 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150		M0R2Z0	102 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	CXorf1	O96002	111 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	SNRPC	P09234	159 aa	Known RBP	12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	RAN	P62826	216 aa	Known RBP	12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	AKR1C8P	Q5T2L2	129 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	FAM122C	Q6P4D5	195 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	C9orf47	Q6ZRZ4	202 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	CCDC28A	Q8IWP9	274 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	LINC01587	Q99440	93 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	NIPSNAP3B	Q9BS92	247 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	OTOR	Q9NRC9	128 aa		12.99	□□□□□ -0.33
PKD1-238	ENST00000570150	LOC102723971	A0A1B0GUV8	181 aa		12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	KANTR	A0A1W2PQU2	76 aa		12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	RBMY1A1	P0DJD3	496 aa	Known RBP	12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	RBMY1C	P0DJD4	496 aa		12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	PMS2P11	Q13670	270 aa		12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	RBMY1F	Q15415	496 aa	Known RBP	12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	RPL7L1	Q6DKI1	246 aa	Known RBP	12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	KCNRG	Q8N5I3	272 aa		12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	RPP25L	Q8N5L8	163 aa	Known RBP	12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	TMED6	Q8WW62	240 aa		12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	LENEP	Q9Y5L5	61 aa		12.98	□□□□□ -0.33
PKD1-238	ENST00000570150	TRAV10	A0A0B4J240	114 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150		K7EQM0	130 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	CRX	O43186	299 aa	Predicted RBP	12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	STAG3L2	P0CL84	134 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	STAG3L3	P0CL85	134 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	RAB2A	P61019	212 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	C1orf158	Q8N1D5	194 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	EXOC3-AS1	Q8N2X6	119 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	C2CD4C	Q8TF44	421 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	C16orf74	Q96GX8	76 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	NKX6-2	Q9C056	277 aa	Predicted RBP	12.97	□□□□□ -0.33
PKD1-238	ENST00000570150		Q9H3A6	140 aa		12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.97	□□□□□ -0.33
PKD1-238	ENST00000570150	FBLL1	A6NHQ2	334 aa	Known RBP	12.96	□□□□□ -0.33
PKD1-238	ENST00000570150	LYRM9	A8MSI8	78 aa		12.96	□□□□□ -0.33
PKD1-238	ENST00000570150	UMAD1	C9J7I0	102 aa		12.96	□□□□□ -0.33
PKD1-238	ENST00000570150	DEFB4A	O15263	64 aa		12.96	□□□□□ -0.33
PKD1-238	ENST00000570150	EIF5AL1	Q6IS14	154 aa	Known RBP	12.96	□□□□□ -0.33
PKD1-238	ENST00000570150	STOML3	Q8TAV4	291 aa		12.96	□□□□□ -0.33
PKD1-238	ENST00000570150	RAB24	Q969Q5	203 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms