RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 RAB4AP20338 218 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 PPIFP30405 207 aaKnown RBP4.68□□□□□ -1.66
CYLD-216ENST00000569891 FABP9Q0Z7S8 132 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 RBPMS2Q6ZRY4 209 aaKnown RBP4.68□□□□□ -1.66
CYLD-216ENST00000569891 OR2D3Q8NGH3 330 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 IGF2BP2-AS1Q96M15 143 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 S4R3C0 116 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 TRBV7-9A0A0J9YWB2 115 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 TMEM189A5PLL7 270 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 TSPOP30536 169 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 OR5I1Q13606 314 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 C19orf54Q5BKX5 351 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 LEMD1Q68G75 181 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 C16orf54Q6UWD8 224 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 C19orf35Q6ZS72 473 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 HOXA3O43365 443 aaPredicted RBP4.68□□□□□ -1.66
CYLD-216ENST00000569891 DUSP14O95147 198 aaKnown RBP4.68□□□□□ -1.66
CYLD-216ENST00000569891 HIST1H1AQ02539 215 aaPredicted RBP4.68□□□□□ -1.66
CYLD-216ENST00000569891 DMRTA1Q5VZB9 504 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 ZNF738Q8NE65 137 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 CCDC140Q96MF4 163 aa4.68□□□□□ -1.66
CYLD-216ENST00000569891 IGHV7-4-1A0A0J9YVY3 117 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 FABP5P3A8MUU1 101 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 ADMP35318 185 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 SRSF2Q01130 221 aaKnown RBP4.67□□□□□ -1.66
CYLD-216ENST00000569891 KHDC1LQ5JSQ8 128 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 ZFAND3Q9H8U3 227 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 SNURFLB1AK76 121 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 LGALS9O00182 355 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 TRGC2P03986 189 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 SRD5A1P18405 259 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 HBBP68871 147 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 REC114Q7Z4M0 266 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 SIGLECL1Q8N7X8 197 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 NRN1Q9NPD7 142 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 SMIM27A0A1W2PRY6 76 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 SMIM6P0DI80 62 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 CRISP2P16562 243 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 GNG5P63218 68 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 MORN5Q5VZ52 161 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 LCN12Q6JVE5 192 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 EBLN2Q6P2I7 272 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 NUDT10Q8NFP7 164 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 NUDT11Q96G61 164 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 V9GYV3 84 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 TRAV34A0A0B4J273 112 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 A0A1B0GUS0 222 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 F2Z2F3 143 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 APCSP02743 223 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 ZNF138P52744 262 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 BLCAPP62952 87 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 BAGE3Q86Y29 109 aa4.67□□□□□ -1.66
CYLD-216ENST00000569891 WIPF2Q8TF74 440 aaPredicted RBP4.67□□□□□ -1.66
CYLD-216ENST00000569891 ABCA2Q9BZC7 2435 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 CDX1P47902 265 aaPredicted RBP4.66□□□□□ -1.66
CYLD-216ENST00000569891 S100A12P80511 92 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 TM4SF20Q53R12 229 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 OXLD1Q5BKU9 147 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 ACTL10Q5JWF8 245 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 EXOC3-AS1Q8N2X6 119 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 DYNLRB2Q8TF09 96 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
CYLD-216ENST00000569891 SMPXQ9UHP9 88 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 U3KQE9 123 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 HIVEP1P15822 2718 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 IGHV3-11P01762 117 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 FOSL1P15407 271 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 PSMB8P28062 276 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 Q8N2B8 174 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 A0A1B0GUT8 65 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 LOC105371267A0A1B0GV96 52 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 SH2D7A6NKC9 451 aaPredicted RBP4.66□□□□□ -1.66
CYLD-216ENST00000569891 UBE2CO00762 179 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 CXCL1P09341 107 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 LEPP41159 167 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 SNRPEP62304 92 aaKnown RBP4.66□□□□□ -1.66
CYLD-216ENST00000569891 NOL4LQ96MY1 436 aaPredicted RBP4.66□□□□□ -1.66
CYLD-216ENST00000569891 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 RHPN1-AS1Q9BWJ2 59 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 MRPL18Q9H0U6 180 aaKnown RBP4.66□□□□□ -1.66
CYLD-216ENST00000569891 LINC00527Q9UJ94 153 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 TRAV2A0A0B4J234 112 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 F8W735 103 aaPredicted RBP4.66□□□□□ -1.66
CYLD-216ENST00000569891 LINC01619G3V211 115 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 AVPP01185 164 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 TRGC1P0CF51 173 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 HOXA5P20719 270 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 KRTAP10-9P60411 292 aa4.66□□□□□ -1.66
CYLD-216ENST00000569891 PMCHP20382 165 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 CFHR3Q02985 330 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 OR10J3Q5JRS4 329 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 C8orf86Q6ZUL3 223 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 TCF24Q7RTU0 167 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 MAPK1IP1LQ8NDC0 245 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 GLMPQ8WWB7 406 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 RNASE7Q9H1E1 156 aaKnown RBP4.65□□□□□ -1.66
CYLD-216ENST00000569891 ARHGAP32A7KAX9 2087 aa4.65□□□□□ -1.66
CYLD-216ENST00000569891 TRBV20OR9-2A0A075B6H5 130 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 TRAV21A0A0B4J279 112 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 C5orf52A6NGY3 159 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms