RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 GRAMD2BQ96HH9 432 aa17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 TRAV8-2A0A0B4J237 113 aa17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 C1orf196B1AJZ1 125 aa17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 CHEK1O14757 476 aa17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 PRB4P10163 310 aaPredicted RBP17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 RPEL1Q2QD12 228 aa17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 Q71RC1 249 aaPredicted RBP17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 PRNTQ86SH4 94 aa17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 PSG8Q9UQ74 426 aa17.17■□□□□ 0.34
VCPKMT-205ENST00000569518 HILS1P60008 231 aa17.16■□□□□ 0.34
VCPKMT-205ENST00000569518 SMPXQ9UHP9 88 aa17.16■□□□□ 0.34
VCPKMT-205ENST00000569518 IGHV4OR15-8A0A075B7B6 117 aa17.15■□□□□ 0.34
VCPKMT-205ENST00000569518 A0A087WW49 117 aa17.15■□□□□ 0.34
VCPKMT-205ENST00000569518 LOC105371267A0A1B0GV96 52 aa17.15■□□□□ 0.34
VCPKMT-205ENST00000569518 RHPN1-AS1Q9BWJ2 59 aa17.15■□□□□ 0.34
VCPKMT-205ENST00000569518 ZFP30Q9Y2G7 519 aa17.15■□□□□ 0.34
VCPKMT-205ENST00000569518 UFC1Q9Y3C8 167 aa17.15■□□□□ 0.34
VCPKMT-205ENST00000569518 NF1P21359 2839 aa17.15■□□□□ 0.34
VCPKMT-205ENST00000569518 IGKV2-40A0A087WW87 121 aaPredicted RBP17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 IGKV2D-40P01614 121 aaPredicted RBP17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 TYMSP04818 313 aa17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 CDX1P47902 265 aaPredicted RBP17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 LCN12Q6JVE5 192 aa17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 RNF182Q8N6D2 247 aa17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 NUDT10Q8NFP7 164 aa17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 ZNF418Q8TF45 676 aaPredicted RBP17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 NUDT11Q96G61 164 aa17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 ZNF492Q9P255 531 aa17.14■□□□□ 0.34
VCPKMT-205ENST00000569518 ZNF705FA8MVS1 300 aaPredicted RBP17.14■□□□□ 0.33
VCPKMT-205ENST00000569518 RAB5BP61020 215 aa17.14■□□□□ 0.33
VCPKMT-205ENST00000569518 PRR27Q6MZM9 219 aa17.14■□□□□ 0.33
VCPKMT-205ENST00000569518 LINC00322Q6ZN03 302 aaPredicted RBP17.14■□□□□ 0.33
VCPKMT-205ENST00000569518 REC114Q7Z4M0 266 aa17.14■□□□□ 0.33
VCPKMT-205ENST00000569518 BIN3Q9NQY0 253 aa17.14■□□□□ 0.33
VCPKMT-205ENST00000569518 TRAV9-1A0A075B6T8 112 aa17.13■□□□□ 0.33
VCPKMT-205ENST00000569518 C19orf71A6NCJ1 209 aa17.13■□□□□ 0.33
VCPKMT-205ENST00000569518 A8MWP6 167 aa17.13■□□□□ 0.33
VCPKMT-205ENST00000569518 ZFP82Q8N141 532 aa17.13■□□□□ 0.33
VCPKMT-205ENST00000569518 MRPL53Q96EL3 112 aaKnown RBP17.13■□□□□ 0.33
VCPKMT-205ENST00000569518 SRD5A3Q9H8P0 318 aa17.13■□□□□ 0.33
VCPKMT-205ENST00000569518 TMEM213A2RRL7 107 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 FBLL1A6NHQ2 334 aaKnown RBP17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 LGALS9O00182 355 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 EDN2P20800 178 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 C18orf65Q6ZTR6 163 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 C16orf95Q9H693 158 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 CUBNO60494 3623 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 ZNF705GA8MUZ8 300 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 SOCS3O14543 225 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 HOXD3P31249 432 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 BTF3L4Q96K17 158 aa17.12■□□□□ 0.33
VCPKMT-205ENST00000569518 SMIM27A0A1W2PRY6 76 aa17.11■□□□□ 0.33
VCPKMT-205ENST00000569518 PRAC2D3DTV9 90 aa17.11■□□□□ 0.33
VCPKMT-205ENST00000569518 C4orf3Q8WVX3 66 aa17.11■□□□□ 0.33
VCPKMT-205ENST00000569518 ZC2HC1AQ96GY0 325 aa17.11■□□□□ 0.33
VCPKMT-205ENST00000569518 PHOX2AO14813 284 aa17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 GATCO43716 136 aaKnown RBP17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 ASCL2Q99929 193 aa17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 VGLL1Q99990 258 aa17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 CLEC5AQ9NY25 188 aa17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 RBAKDNA6NC62 111 aa17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 CA1P00915 261 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 TRGC2P03986 189 aa17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 COX8CQ7Z4L0 72 aa17.1■□□□□ 0.33
VCPKMT-205ENST00000569518 SYNJ2BPP57105 145 aa17.09■□□□□ 0.33
VCPKMT-205ENST00000569518 NRN1Q9NPD7 142 aa17.09■□□□□ 0.33
VCPKMT-205ENST00000569518 NPIPB6E9PJ23 425 aa17.08■□□□□ 0.33
VCPKMT-205ENST00000569518 FOSL1P15407 271 aa17.08■□□□□ 0.33
VCPKMT-205ENST00000569518 KLF5Q13887 457 aaPredicted RBP17.08■□□□□ 0.33
VCPKMT-205ENST00000569518 GBGT1Q8N5D6 347 aa17.08■□□□□ 0.33
VCPKMT-205ENST00000569518 C16orf92Q96LL3 132 aa17.08■□□□□ 0.33
VCPKMT-205ENST00000569518 DEFB136Q30KP8 78 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 LINC01006Q8NI28 216 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 WFDC12Q8WWY7 111 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 RPP21Q9H633 154 aaKnown RBP17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 CT83Q5H943 113 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 C20orf173Q96LM9 149 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 C8orf49Q96NF6 230 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 PRR25Q96S07 402 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 HIVEP1P15822 2718 aa17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 NSD1Q96L73 2696 aaPredicted RBP17.07■□□□□ 0.32
VCPKMT-205ENST00000569518 P01737 135 aa17.06■□□□□ 0.32
VCPKMT-205ENST00000569518 BMI1P35226 326 aa17.06■□□□□ 0.32
VCPKMT-205ENST00000569518 SAPCD1Q5SSQ6 148 aa17.06■□□□□ 0.32
VCPKMT-205ENST00000569518 Q8TAT8 98 aa17.06■□□□□ 0.32
VCPKMT-205ENST00000569518 TSKUQ8WUA8 353 aa17.06■□□□□ 0.32
VCPKMT-205ENST00000569518 CRIP1P50238 77 aa17.05■□□□□ 0.32
VCPKMT-205ENST00000569518 TCL1AP56279 114 aa17.05■□□□□ 0.32
VCPKMT-205ENST00000569518 TCF24Q7RTU0 167 aa17.05■□□□□ 0.32
VCPKMT-205ENST00000569518 LINC01619G3V211 115 aa17.05■□□□□ 0.32
VCPKMT-205ENST00000569518 DAZAP1Q96EP5 407 aaKnown RBP17.05■□□□□ 0.32
VCPKMT-205ENST00000569518 JMJD8Q96S16 334 aa17.05■□□□□ 0.32
VCPKMT-205ENST00000569518 INAFM1C9JVW0 142 aa17.04■□□□□ 0.32
VCPKMT-205ENST00000569518 NDUFA7O95182 113 aa17.04■□□□□ 0.32
VCPKMT-205ENST00000569518 SLURP1P55000 103 aa17.04■□□□□ 0.32
VCPKMT-205ENST00000569518 RPL11P62913 178 aaKnown RBP17.04■□□□□ 0.32
VCPKMT-205ENST00000569518 ERCC8Q13216 396 aa17.04■□□□□ 0.32
VCPKMT-205ENST00000569518 KHDC1LQ5JSQ8 128 aa17.04■□□□□ 0.32
VCPKMT-205ENST00000569518 GPR61Q9BZJ8 451 aa17.04■□□□□ 0.32
VCPKMT-205ENST00000569518 C2orf70A6NJV1 201 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms