RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 RBP4P02753 201 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 IL3P08700 152 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 ZNF322Q6U7Q0 402 aaPredicted RBP3.49□□□□□ -1.85
UBR1-208ENST00000569066 BAGE3Q86Y29 109 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 BAGE2Q86Y30 109 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 MRPL32Q9BYC8 188 aaKnown RBP3.49□□□□□ -1.85
UBR1-208ENST00000569066 TP53TG1Q9Y2A0 90 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 HILPDAQ9Y5L2 63 aa3.49□□□□□ -1.85
UBR1-208ENST00000569066 SLIT2O94813 1529 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 SCN7AQ01118 1682 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 IGHV3-72A0A0B4J1Y9 119 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 CDC42EP2O14613 210 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 TNFP01375 233 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 IGLV2-8P01709 118 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 IL15RAQ13261 267 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 Q499Y3 187 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 IBA57Q5T440 356 aaKnown RBP3.48□□□□□ -1.85
UBR1-208ENST00000569066 UBALD1Q8TB05 177 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 PRORYQ9H606 182 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 KIF26AQ9ULI4 1882 aaPredicted RBP3.48□□□□□ -1.85
UBR1-208ENST00000569066 DOCK6Q96HP0 2047 aa3.48□□□□□ -1.85
UBR1-208ENST00000569066 TRAV1-2A0A0B4J238 106 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 APOMO95445 188 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 IGKV5-2P06315 115 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 HSPE1P61604 102 aaKnown RBP3.47□□□□□ -1.85
UBR1-208ENST00000569066 FAM53BQ14153 422 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 Q56UQ5 140 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 EBLN2Q6P2I7 272 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 Q6ZQT7 251 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 GAPTQ8N292 157 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 OR4K13Q8NH42 304 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 KLK6Q92876 244 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 DYSFO75923 2080 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 VWA8A3KMH1 1905 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 AHDC1Q5TGY3 1603 aaPredicted RBP3.47□□□□□ -1.85
UBR1-208ENST00000569066 TIAM2Q8IVF5 1701 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 ADAMTSL1Q8N6G6 1762 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 TECPR2O15040 1411 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 IGKV6-21A0A0C4DH24 114 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 H3BMG7 143 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 SYS1-DBNDD2H3BUS1 97 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 ZNF324O75467 553 aaPredicted RBP3.47□□□□□ -1.85
UBR1-208ENST00000569066 ZNF708P17019 499 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 OPRK1P41145 380 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 GUSBP1Q15486 140 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 NMSQ5H8A3 153 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 FAM19A2Q8N3H0 131 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 GATD1Q8NB37 220 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 SGMS2Q8NHU3 365 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 ZNF721Q8TF20 911 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 COL1A1P02452 1464 aaPredicted RBP3.47□□□□□ -1.85
UBR1-208ENST00000569066 ANK1P16157 1881 aa3.47□□□□□ -1.85
UBR1-208ENST00000569066 TRAV5A0A0B4J249 113 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 IGHV3-7P01780 117 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 IGHMP01871 453 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 HLA-DQA1P01909 254 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 SCTP09683 121 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 CNTFRP26992 372 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 Q6Q795 121 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 OR8B3Q8NGG8 313 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 OTOSQ8NHW6 89 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 LINC01560Q8TB33 94 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 MRPL30Q8TCC3 161 aaKnown RBP3.46□□□□□ -1.85
UBR1-208ENST00000569066 PGLYRP3Q96LB9 341 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 RPRMQ9NS64 109 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 CKLFQ9UBR5 152 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 MPC1Q9Y5U8 109 aa3.46□□□□□ -1.85
UBR1-208ENST00000569066 DOT1LQ8TEK3 1739 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 BTAF1O14981 1849 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 ARFGEF1Q9Y6D6 1849 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 KIAA2026Q5HYC2 2103 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 MYLKQ15746 1914 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 QSER1Q2KHR3 1735 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 SVILO95425 2214 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 IRGMA1A4Y4 181 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 CBLN1P23435 193 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 CMC4P56277 68 aaPredicted RBP3.46□□□□□ -1.86
UBR1-208ENST00000569066 SPRNQ5BIV9 151 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 ZFP62Q8NB50 900 aaPredicted RBP3.46□□□□□ -1.86
UBR1-208ENST00000569066 C2orf15Q8WU43 125 aaKnown RBP3.46□□□□□ -1.86
UBR1-208ENST00000569066 DPH3Q96FX2 82 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 DOCK1Q14185 1865 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 ANKRD36A6QL64 1941 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 DOCK4Q8N1I0 1966 aa3.46□□□□□ -1.86
UBR1-208ENST00000569066 TOGARAM1Q9Y4F4 1720 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 RGPD3A6NKT7 1758 aaPredicted RBP3.45□□□□□ -1.86
UBR1-208ENST00000569066 RGPD4Q7Z3J3 1758 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 NYNRINQ9P2P1 1898 aaKnown RBP3.45□□□□□ -1.86
UBR1-208ENST00000569066 LOC107986453A0A1B0GWG9 222 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 C2orf70A6NJV1 201 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 J3QRE1 110 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 J3QT63 122 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 FFAR1O14842 300 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 IGHV3-11P01762 117 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 APOA2P02652 100 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 MT-ND6P03923 174 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 ZNF32P17041 273 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 TMEM14EPQ6UXP3 125 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 CYP2G1PQ6ZSU1 146 aa3.45□□□□□ -1.86
UBR1-208ENST00000569066 OR4X2Q8NGF9 303 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms