RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 FRZBQ92765 325 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 SMIM8Q96KF7 97 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 A0A096LPF7 62 aa10.82□□□□□ -0.68
HERPUD1-215ENST00000568676 GOSR2O14653 212 aa10.82□□□□□ -0.68
HERPUD1-215ENST00000568676 INPP1P49441 399 aa10.82□□□□□ -0.68
HERPUD1-215ENST00000568676 POLR2GP62487 172 aaKnown RBP eCLIP10.82□□□□□ -0.68
HERPUD1-215ENST00000568676 TRIM63Q969Q1 353 aa10.82□□□□□ -0.68
HERPUD1-215ENST00000568676 TMPRSS5Q9H3S3 457 aa10.82□□□□□ -0.68
HERPUD1-215ENST00000568676 TRGV2A0A075B6R0 118 aa10.81□□□□□ -0.68
HERPUD1-215ENST00000568676 TAS2R30P59541 319 aa10.81□□□□□ -0.68
HERPUD1-215ENST00000568676 KIR3DS1Q14943 382 aa10.81□□□□□ -0.68
HERPUD1-215ENST00000568676 GUK1Q16774 197 aa10.81□□□□□ -0.68
HERPUD1-215ENST00000568676 TMEM14EPQ6UXP3 125 aa10.81□□□□□ -0.68
HERPUD1-215ENST00000568676 VSIG2Q96IQ7 327 aa10.81□□□□□ -0.68
HERPUD1-215ENST00000568676 GGACTQ9BVM4 153 aa10.81□□□□□ -0.68
HERPUD1-215ENST00000568676 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 K7EP13 123 aa10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 SSSCA1O60232 199 aa10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 IFNA5P01569 189 aa10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 RRAS2P62070 204 aaPredicted RBP10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 TRIQKQ629K1 86 aa10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 Q6ZTI0 123 aa10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 LINC00467Q9BRT7 94 aa10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 SRRQ9GZT4 340 aa10.8□□□□□ -0.68
HERPUD1-215ENST00000568676 TRAV9-2A0A087WT02 112 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 TRAV12-3A0A0B4J271 114 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 NPIPB6E9PJ23 425 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 AGPAT2O15120 278 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 COX7A2P2O60397 106 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 TSC22D2O75157 780 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 SLC25A5P05141 298 aaKnown RBP10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 XGP55808 180 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 SLAQ13239 276 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 LINC00299Q6ZSB3 139 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 ZNF431Q8TF32 576 aaPredicted RBP10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 PARD6GQ9BYG4 376 aaPredicted RBP10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 BATF3Q9NR55 127 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 ICOSQ9Y6W8 199 aa10.79□□□□□ -0.68
HERPUD1-215ENST00000568676 A6NHS1 94 aa10.78□□□□□ -0.68
HERPUD1-215ENST00000568676 PRAC2D3DTV9 90 aa10.78□□□□□ -0.68
HERPUD1-215ENST00000568676 METTL15P1P0C7V9 234 aa10.78□□□□□ -0.68
HERPUD1-215ENST00000568676 CT45A10P0DMU9 189 aa10.78□□□□□ -0.68
HERPUD1-215ENST00000568676 Q5VSD8 79 aa10.78□□□□□ -0.68
HERPUD1-215ENST00000568676 ZBTB8BQ8NAP8 495 aaPredicted RBP10.78□□□□□ -0.68
HERPUD1-215ENST00000568676 SAT2Q96F10 170 aaPredicted RBP10.78□□□□□ -0.68
HERPUD1-215ENST00000568676 C9orf170A2RU37 121 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 SLC17A3O00476 420 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 ZNF253O75346 499 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 NXPH4O95158 308 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 Q6ZRG5 221 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 MRPL53Q96EL3 112 aaKnown RBP10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 FUT9Q9Y231 359 aa10.77□□□□□ -0.69
HERPUD1-215ENST00000568676 C7orf71A4D174 169 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 NAP1L6A6NFF2 107 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 CENPXA8MT69 81 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 J3KRW8 73 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 PAX4O43316 350 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 CCNKO75909 580 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 PRB4P10163 310 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 RAB31Q13636 194 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 OPCMLQ14982 345 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 IBA57Q5T440 356 aaKnown RBP10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 EIF4E3Q8N5X7 224 aaKnown RBP10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 C11orf72Q8NBR9 251 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 TMEM37Q8WXS4 190 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 ST6GAL2Q96JF0 529 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 DNAJC4Q9NNZ3 241 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 GSN-AS1Q9NRJ2 163 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 PRO0255Q9UI72 69 aa10.76□□□□□ -0.69
HERPUD1-215ENST00000568676 TRGV1A0A0A0MS02 117 aa10.75□□□□□ -0.69
HERPUD1-215ENST00000568676 SPINK4O60575 86 aa10.75□□□□□ -0.69
HERPUD1-215ENST00000568676 CNPY1Q3B7I2 92 aa10.75□□□□□ -0.69
HERPUD1-215ENST00000568676 OR1L4Q8NGR5 311 aa10.75□□□□□ -0.69
HERPUD1-215ENST00000568676 LINC00477Q96M19 166 aa10.75□□□□□ -0.69
HERPUD1-215ENST00000568676 PFDN5Q99471 154 aa10.75□□□□□ -0.69
HERPUD1-215ENST00000568676 A0A087WTM6 91 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 LINC00854A0A1B0GVQ3 168 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 KLLNB2CW77 178 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 H3BQ15 152 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 NMBP08949 121 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 SNRPCP09234 159 aaKnown RBP10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 OR4E1P0C645 316 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 TCL1AP56279 114 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 ICAM4Q14773 271 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 MRPL23Q16540 153 aaKnown RBP10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 BAK1Q16611 211 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 C12orf45Q8N5I9 185 aaPredicted RBP10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 S100ZQ8WXG8 99 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 PRELID1Q9Y255 219 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 LY96Q9Y6Y9 160 aa10.74□□□□□ -0.69
HERPUD1-215ENST00000568676 H3BTX0 84 aa10.73□□□□□ -0.69
HERPUD1-215ENST00000568676 CAMLGP49069 296 aa10.73□□□□□ -0.69
HERPUD1-215ENST00000568676 IAH1Q2TAA2 248 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-215ENST00000568676 MGST2Q99735 147 aa10.73□□□□□ -0.69
HERPUD1-215ENST00000568676 VGLL1Q99990 258 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms