RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 DEFA3P59666 94 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 UBE2MP61081 183 aaKnown RBP10.74□□□□□ -0.69
NME3-211ENST00000568561 ARL16Q0P5N6 197 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 ESRGQ1W209 222 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 TTC32Q5I0X7 151 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 SLC50A1Q9BRV3 221 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 Q9H3A6 140 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 TMPRSS5Q9H3S3 457 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 NPVFQ9HCQ7 196 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 RCL1Q9Y2P8 373 aaKnown RBP10.74□□□□□ -0.69
NME3-211ENST00000568561 CENPXA8MT69 81 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 AGPAT2O15120 278 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 RLN2P04090 185 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 BTCP35070 178 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 OPCMLQ14982 345 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 IAH1Q2TAA2 248 aaPredicted RBP10.73□□□□□ -0.69
NME3-211ENST00000568561 S100A7AQ86SG5 101 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 ZNF546Q86UE3 836 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 ZBTB8BQ8NAP8 495 aaPredicted RBP10.73□□□□□ -0.69
NME3-211ENST00000568561 OR10P1Q8NGE3 313 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 ZNF586Q9NXT0 402 aa10.73□□□□□ -0.69
NME3-211ENST00000568561 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 SNURFLB1AK76 121 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 H3BQ15 152 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 NDUFB6O95139 128 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 OR4E1P0C645 316 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 MZT2BQ6NZ67 158 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 Q6ZTI0 123 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 BPIFA4PQ86YQ2 179 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 CCDC28AQ8IWP9 274 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 MGST2Q99735 147 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
NME3-211ENST00000568561 TRAV5A0A0B4J249 113 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 FNDC10F2Z333 226 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 TSC22D2O75157 780 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 CT45A10P0DMU9 189 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 IGLC2P0DOY2 106 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 C4orf46Q504U0 113 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 ZNF503Q96F45 646 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 UPK3BQ9BT76 320 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 GSKIPQ9P0R6 139 aa10.71□□□□□ -0.69
NME3-211ENST00000568561 MRPS16Q9Y3D3 137 aaKnown RBP10.71□□□□□ -0.69
NME3-211ENST00000568561 PTTG1O95997 202 aa10.7□□□□□ -0.7
NME3-211ENST00000568561 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
NME3-211ENST00000568561 RGS21Q2M5E4 152 aa10.7□□□□□ -0.7
NME3-211ENST00000568561 PXDC1Q5TGL8 231 aa10.7□□□□□ -0.7
NME3-211ENST00000568561 C10orf113Q5VZT2 155 aa10.7□□□□□ -0.7
NME3-211ENST00000568561 FAT1Q14517 4588 aa10.7□□□□□ -0.7
NME3-211ENST00000568561 C7orf66A4D0T2 115 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 CCSO14618 274 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 LEPP41159 167 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 LINC00315P59091 139 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 NRARPQ7Z6K4 114 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 SAT2Q96F10 170 aaPredicted RBP10.69□□□□□ -0.7
NME3-211ENST00000568561 VSIG2Q96IQ7 327 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 PXMP4Q9Y6I8 212 aa10.69□□□□□ -0.7
NME3-211ENST00000568561 FAM240BA0A1B0GVZ2 78 aa10.68□□□□□ -0.7
NME3-211ENST00000568561 A0A1W2PPQ1 181 aa10.68□□□□□ -0.7
NME3-211ENST00000568561 NPIPB6E9PJ23 425 aa10.68□□□□□ -0.7
NME3-211ENST00000568561 MBPP02686 304 aaPredicted RBP10.68□□□□□ -0.7
NME3-211ENST00000568561 TAS2R30P59541 319 aa10.68□□□□□ -0.7
NME3-211ENST00000568561 MIC13Q5XKP0 118 aa10.68□□□□□ -0.7
NME3-211ENST00000568561 ZNF431Q8TF32 576 aaPredicted RBP10.68□□□□□ -0.7
NME3-211ENST00000568561 GSN-AS1Q9NRJ2 163 aa10.68□□□□□ -0.7
NME3-211ENST00000568561 DMBT1Q9UGM3 2413 aaPredicted RBP10.67□□□□□ -0.7
NME3-211ENST00000568561 A0A096LPF7 62 aa10.67□□□□□ -0.7
NME3-211ENST00000568561 M0R3E3 92 aa10.67□□□□□ -0.7
NME3-211ENST00000568561 TCRBP04435 133 aa10.67□□□□□ -0.7
NME3-211ENST00000568561 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
NME3-211ENST00000568561 CAMLGP49069 296 aa10.67□□□□□ -0.7
NME3-211ENST00000568561 ERCC8Q13216 396 aa10.67□□□□□ -0.7
NME3-211ENST00000568561 ENKURQ8TC29 256 aa10.67□□□□□ -0.7
NME3-211ENST00000568561 TRGV2A0A075B6R0 118 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 TRGV1A0A0A0MS02 117 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 H3BNG1 76 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 CST7O76096 145 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
NME3-211ENST00000568561 BTN1A1Q13410 526 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 Q6ZRN7 208 aaPredicted RBP10.66□□□□□ -0.7
NME3-211ENST00000568561 C11orf72Q8NBR9 251 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 PYGO2Q9BRQ0 406 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 GGACTQ9BVM4 153 aa10.66□□□□□ -0.7
NME3-211ENST00000568561 LSM5Q9Y4Y9 91 aaKnown RBP10.66□□□□□ -0.7
NME3-211ENST00000568561 C7orf71A4D174 169 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 L7N2F9 121 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 VAMP2P63027 116 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 CD300CQ08708 224 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 MITD1Q8WV92 249 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 MARVELD1Q9BSK0 173 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 FUT9Q9Y231 359 aa10.65□□□□□ -0.7
NME3-211ENST00000568561 IGHV3-53P01767 116 aa10.64□□□□□ -0.71
NME3-211ENST00000568561 BCAP31P51572 246 aa10.64□□□□□ -0.71
NME3-211ENST00000568561 CAV2P51636 162 aa10.64□□□□□ -0.71
NME3-211ENST00000568561 Q6ZRG5 221 aa10.64□□□□□ -0.71
NME3-211ENST00000568561 KLF12Q9Y4X4 402 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms