RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-223	ENST00000568301	KIR3DS1	Q14943	382 aa		10.43	□□□□□ -0.74
COMMD4-223	ENST00000568301	GFI1B	Q5VTD9	330 aa		10.43	□□□□□ -0.74
COMMD4-223	ENST00000568301	PXMP4	Q9Y6I8	212 aa		10.43	□□□□□ -0.74
COMMD4-223	ENST00000568301	PRAC2	D3DTV9	90 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	RLN2	P04090	185 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	HOXA5	P20719	270 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	ESRG	Q1W209	222 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	IAH1	Q2TAA2	248 aa	Predicted RBP	10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	TMEM37	Q8WXS4	190 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	ODF3	Q96PU9	254 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	KRTAP1-5	Q9BYS1	174 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	FLVCR2	Q9UPI3	526 aa		10.42	□□□□□ -0.74
COMMD4-223	ENST00000568301	GAGE12B	A1L429	117 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	SNURFL	B1AK76	121 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	PLA2G10	O15496	165 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	COX7A2P2	O60397	106 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	UPK1B	O75841	260 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	GAGE7	O76087	117 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	SCGB1D2	O95969	90 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	SNRPC	P09234	159 aa	Known RBP	10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	GAGE12F	P0CL80	117 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	GAGE12G	P0CL81	117 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	GAGE12I	P0CL82	117 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	IGLC2	P0DOY2	106 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	KRTAP10-2	P60368	255 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	ARL16	Q0P5N6	197 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	DAZ2	Q13117	558 aa	Known RBP	10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	C10orf113	Q5VZT2	155 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	SAT2	Q96F10	170 aa	Predicted RBP	10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	DNAJC4	Q9NNZ3	241 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	GSKIP	Q9P0R6	139 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	RCL1	Q9Y2P8	373 aa	Known RBP	10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301	VPS13B	Q7Z7G8	4022 aa		10.41	□□□□□ -0.74
COMMD4-223	ENST00000568301		A0A0J9YY99	117 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	C7orf66	A4D0T2	115 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301		H3BQ15	152 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	SLC17A3	O00476	420 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	CT45A10	P0DMU9	189 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	OPCML	Q14982	345 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	GUK1	Q16774	197 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	MORN5	Q5VZ52	161 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	ZNF431	Q8TF32	576 aa	Predicted RBP	10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	MGST2	Q99735	147 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	PYGO2	Q9BRQ0	406 aa		10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	MRPS16	Q9Y3D3	137 aa	Known RBP	10.4	□□□□□ -0.74
COMMD4-223	ENST00000568301	FAT1	Q14517	4588 aa		10.4	□□□□□ -0.75
COMMD4-223	ENST00000568301	NPIPB6	E9PJ23	425 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301		H3BTX0	84 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	LYRM1	O43325	122 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	MBP	P02686	304 aa	Predicted RBP	10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	LEP	P41159	167 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	ASAH1	Q13510	395 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	RAB31	Q13636	194 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301		Q6ZRG5	221 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	MITD1	Q8WV92	249 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	C18orf15	Q96N68	181 aa		10.39	□□□□□ -0.75
COMMD4-223	ENST00000568301	TRAV12-3	A0A0B4J271	114 aa		10.38	□□□□□ -0.75
COMMD4-223	ENST00000568301	CAMLG	P49069	296 aa		10.38	□□□□□ -0.75
COMMD4-223	ENST00000568301	MZT2B	Q6NZ67	158 aa		10.38	□□□□□ -0.75
COMMD4-223	ENST00000568301	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.38	□□□□□ -0.75
COMMD4-223	ENST00000568301	LINC00854	A0A1B0GVQ3	168 aa		10.37	□□□□□ -0.75
COMMD4-223	ENST00000568301	ZNF253	O75346	499 aa		10.37	□□□□□ -0.75
COMMD4-223	ENST00000568301	SLC25A5	P05141	298 aa	Known RBP	10.37	□□□□□ -0.75
COMMD4-223	ENST00000568301		Q6ZTI0	123 aa		10.37	□□□□□ -0.75
COMMD4-223	ENST00000568301	TMPRSS5	Q9H3S3	457 aa		10.37	□□□□□ -0.75
COMMD4-223	ENST00000568301	MYCBP2	O75592	4640 aa		10.37	□□□□□ -0.75
COMMD4-223	ENST00000568301		J3KRW8	73 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301		L7N2F9	121 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	BTC	P35070	178 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	DEFA1	P59665	94 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	DEFA3	P59666	94 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	VAMP2	P63027	116 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	IFITM3	Q01628	133 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	NRARP	Q7Z6K4	114 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	OR1L4	Q8NGR5	311 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	MRPL53	Q96EL3	112 aa	Known RBP	10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	VSIG2	Q96IQ7	327 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	PFDN5	Q99471	154 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	LINC00467	Q9BRT7	94 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301	ZNF586	Q9NXT0	402 aa		10.36	□□□□□ -0.75
COMMD4-223	ENST00000568301		A0A096LPF7	62 aa		10.35	□□□□□ -0.75
COMMD4-223	ENST00000568301	TRAV5	A0A0B4J249	113 aa		10.35	□□□□□ -0.75
COMMD4-223	ENST00000568301	MIC13	Q5XKP0	118 aa		10.35	□□□□□ -0.75
COMMD4-223	ENST00000568301	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.35	□□□□□ -0.75
COMMD4-223	ENST00000568301	ZNF680	Q8NEM1	530 aa		10.35	□□□□□ -0.75
COMMD4-223	ENST00000568301	LINC00477	Q96M19	166 aa		10.35	□□□□□ -0.75
COMMD4-223	ENST00000568301	WDR83OS	Q9Y284	106 aa		10.35	□□□□□ -0.75
COMMD4-223	ENST00000568301	TRGV2	A0A075B6R0	118 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	FAM240B	A0A1B0GVZ2	78 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	KLLN	B2CW77	178 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	EPM2A	B3EWF7	344 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	ZNF324	O75467	553 aa	Predicted RBP	10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	TCRB	P04435	133 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	RPL29	P47914	159 aa	Known RBP	10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	VWC2	Q2TAL6	325 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	C11orf72	Q8NBR9	251 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	GSN-AS1	Q9NRJ2	163 aa		10.34	□□□□□ -0.75
COMMD4-223	ENST00000568301	UQCC1	Q9NVA1	299 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms