RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 KLHDC1Q8N7A1 406 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 DAZAP1Q96EP5 407 aaKnown RBP5.42□□□□□ -1.54
SMG1-215ENST00000568239 ZNF580Q9UK33 172 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 V9GYV3 84 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 LTAP01374 205 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 S100A9P06702 114 aaKnown RBP5.41□□□□□ -1.54
SMG1-215ENST00000568239 ELANEP08246 267 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 Q86TA4 180 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 C11orf44Q8N8P7 122 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 GRAMD2BQ96HH9 432 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 ESM1Q9NQ30 184 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 ZNF331Q9NQX6 463 aaPredicted RBP5.41□□□□□ -1.54
SMG1-215ENST00000568239 OSTCQ9NRP0 149 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 IL36BQ9NZH7 164 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 PSG8Q9UQ74 426 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 CHEK1O14757 476 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 GATCO43716 136 aaKnown RBP5.41□□□□□ -1.54
SMG1-215ENST00000568239 SRD5A1P18405 259 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 FOXE3Q13461 319 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 PSG3Q16557 428 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 C1orf194Q5T5A4 169 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 TMEM190Q8WZ59 177 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 FRZBQ92765 325 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 NUDT11Q96G61 164 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 C16orf92Q96LL3 132 aa5.41□□□□□ -1.54
SMG1-215ENST00000568239 DAZ1Q9NQZ3 744 aaKnown RBP5.41□□□□□ -1.54
SMG1-215ENST00000568239 A0A1W2PS18 150 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 IGLV2-11P01706 119 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 EDN2P20800 178 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 FOXL1Q12952 345 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 DEFB136Q30KP8 78 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 LCN12Q6JVE5 192 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 RHPN1-AS1Q9BWJ2 59 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 P01737 135 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 SYNJ2BPP57105 145 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
SMG1-215ENST00000568239 LINC00322Q6ZN03 302 aaPredicted RBP5.4□□□□□ -1.54
SMG1-215ENST00000568239 Q6ZSV7 163 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 C18orf65Q6ZTR6 163 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 C8orf86Q6ZUL3 223 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 TMEM183AQ8IXX5 376 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 TMEM86BQ8N661 226 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 TMEM75Q8N9X5 138 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 Q8TAT8 98 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 IMMP2LQ96T52 175 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 SRD5A3Q9H8P0 318 aa5.4□□□□□ -1.54
SMG1-215ENST00000568239 IGHV4OR15-8A0A075B7B6 117 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 A0A087WW49 117 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 TMEM89A2RUT3 159 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 GBGT1Q8N5D6 347 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 VGLL1Q99990 258 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 SLC50A1Q9BRV3 221 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 MLST8Q9BVC4 326 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 U3KQE9 123 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 OTOGQ6ZRI0 2925 aa5.4□□□□□ -1.55
SMG1-215ENST00000568239 IGHV7-4-1A0A0J9YVY3 117 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 PRAC2D3DTV9 90 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 ZNF253O75346 499 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 LY6G6DO95868 133 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 LGALS1P09382 135 aaKnown RBP5.39□□□□□ -1.55
SMG1-215ENST00000568239 CT45A10P0DMU9 189 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 AKR1D1P51857 326 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 RAB4BP61018 213 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 FABP9Q0Z7S8 132 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 ERCC8Q13216 396 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 SCGB2A2Q13296 93 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 MRPL54Q6P161 138 aaKnown RBP5.39□□□□□ -1.55
SMG1-215ENST00000568239 WFDC3Q8IUB2 231 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 ZNF418Q8TF45 676 aaPredicted RBP5.39□□□□□ -1.55
SMG1-215ENST00000568239 GLMPQ8WWB7 406 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 SMIM12Q96EX1 92 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 BTF3L4Q96K17 158 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 C8orf49Q96NF6 230 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 DUX3Q96PT4 197 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 PYGO2Q9BRQ0 406 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 BIN3Q9NQY0 253 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 ZFP30Q9Y2G7 519 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 TRAPPC1Q9Y5R8 145 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 A0A087X0K7 114 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 TRGC1P0CF51 173 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 NDUFA6P56556 154 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 GPHB5Q86YW7 130 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 Q8N2B8 174 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 ZC2HC1AQ96GY0 325 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 PPP1R14DQ9NXH3 145 aa5.39□□□□□ -1.55
SMG1-215ENST00000568239 ANK3Q12955 4377 aaKnown RBP5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 FRMD6-AS1P0C7T7 363 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 ZNF705DP0CH99 300 aaPredicted RBP5.38□□□□□ -1.55
SMG1-215ENST00000568239 ZNF705BP0CI00 300 aaPredicted RBP5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HOXD3P31249 432 aaPredicted RBP5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 TFPI2P48307 235 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms