RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 IFNA7P01567 189 aa11.62□□□□□ -0.55
SPG7-218ENST00000568205 HBE1P02100 147 aa11.62□□□□□ -0.55
SPG7-218ENST00000568205 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
SPG7-218ENST00000568205 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
SPG7-218ENST00000568205 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
SPG7-218ENST00000568205 A0A1W2PRE2 83 aa11.61□□□□□ -0.55
SPG7-218ENST00000568205 F6UB75 175 aa11.61□□□□□ -0.55
SPG7-218ENST00000568205 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
SPG7-218ENST00000568205 GDF5OSQ5U4N7 250 aa11.61□□□□□ -0.55
SPG7-218ENST00000568205 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
SPG7-218ENST00000568205 MRAPQ8TCY5 172 aa11.61□□□□□ -0.55
SPG7-218ENST00000568205 YTHDF2Q9Y5A9 579 aaKnown RBP11.61□□□□□ -0.55
SPG7-218ENST00000568205 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
SPG7-218ENST00000568205 A0A0J9YX75 114 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 PGPA6NDG6 321 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 PRB4P10163 310 aaPredicted RBP11.6□□□□□ -0.55
SPG7-218ENST00000568205 UBE2G2P60604 165 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 CCL20P78556 96 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 DEFB121Q5J5C9 76 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 STHQ8IWL8 128 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 OR8A1Q8NGG7 326 aa11.6□□□□□ -0.55
SPG7-218ENST00000568205 RBMY1BA6NDE4 496 aaKnown RBP11.59□□□□□ -0.55
SPG7-218ENST00000568205 RBMY1EA6NEQ0 496 aaKnown RBP11.59□□□□□ -0.55
SPG7-218ENST00000568205 FAM74A7A6NL05 159 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 GGTLC3B5MD39 225 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 H3BMM0 161 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 RBMY1DP0C7P1 496 aaKnown RBP11.59□□□□□ -0.55
SPG7-218ENST00000568205 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
SPG7-218ENST00000568205 CSN1S1P47710 185 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 PPT1P50897 306 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
SPG7-218ENST00000568205 TRPT1Q86TN4 253 aaKnown RBP11.59□□□□□ -0.55
SPG7-218ENST00000568205 CMTM2Q8TAZ6 248 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 ARL2-SNX15V9GYD0 113 aa11.59□□□□□ -0.55
SPG7-218ENST00000568205 LOC102724200A0A096LPH7 203 aaPredicted RBP11.58□□□□□ -0.56
SPG7-218ENST00000568205 DUSP14O95147 198 aaKnown RBP11.58□□□□□ -0.56
SPG7-218ENST00000568205 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
SPG7-218ENST00000568205 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
SPG7-218ENST00000568205 SUMO1P63165 101 aaKnown RBP11.58□□□□□ -0.56
SPG7-218ENST00000568205 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
SPG7-218ENST00000568205 PAGE4O60829 102 aa11.57□□□□□ -0.56
SPG7-218ENST00000568205 SLC25A5P05141 298 aaKnown RBP11.57□□□□□ -0.56
SPG7-218ENST00000568205 CNN1P51911 297 aaKnown RBP11.57□□□□□ -0.56
SPG7-218ENST00000568205 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
SPG7-218ENST00000568205 C5orf17Q8NAS9 161 aa11.57□□□□□ -0.56
SPG7-218ENST00000568205 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
SPG7-218ENST00000568205 OR10J6PQ8NGY7 276 aa11.57□□□□□ -0.56
SPG7-218ENST00000568205 NKX6-2Q9C056 277 aaPredicted RBP11.57□□□□□ -0.56
SPG7-218ENST00000568205 MANBALQ9NQG1 85 aa11.57□□□□□ -0.56
SPG7-218ENST00000568205 GNG13Q9P2W3 67 aa11.57□□□□□ -0.56
SPG7-218ENST00000568205 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
SPG7-218ENST00000568205 A8MTW9 85 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
SPG7-218ENST00000568205 IGKV3-20P01619 116 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 GNG5P63218 68 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 CLUHP3Q96NS8 147 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 RPH3ALQ9UNE2 315 aa11.56□□□□□ -0.56
SPG7-218ENST00000568205 KIR2DL5BA0A0G2JN68 375 aa11.55□□□□□ -0.56
SPG7-218ENST00000568205 KIR2DL5BA0A0G2JPC4 375 aa11.55□□□□□ -0.56
SPG7-218ENST00000568205 NPIPB6E9PJ23 425 aa11.55□□□□□ -0.56
SPG7-218ENST00000568205 IFNA1P01562 189 aa11.55□□□□□ -0.56
SPG7-218ENST00000568205 KIR2DL5AQ8N109 375 aa11.55□□□□□ -0.56
SPG7-218ENST00000568205 KIR2DL5BQ8NHK3 375 aa11.55□□□□□ -0.56
SPG7-218ENST00000568205 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
SPG7-218ENST00000568205 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
SPG7-218ENST00000568205 RBAKDNA6NC62 111 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 TCRAP04437 139 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 NMBP08949 121 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 ATP5G3P48201 142 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 APOC4P55056 127 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 IFITM2Q01629 132 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
SPG7-218ENST00000568205 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 GOLT1AQ6ZVE7 132 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 ZNF767PQ75MW2 155 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 CSTL1Q9H114 145 aa11.54□□□□□ -0.56
SPG7-218ENST00000568205 BCL2P10415 239 aa11.53□□□□□ -0.56
SPG7-218ENST00000568205 NUTF2P61970 127 aaKnown RBP11.53□□□□□ -0.56
SPG7-218ENST00000568205 ERCC8Q13216 396 aa11.53□□□□□ -0.56
SPG7-218ENST00000568205 HAGHQ16775 308 aa11.53□□□□□ -0.56
SPG7-218ENST00000568205 C9orf47Q6ZRZ4 202 aa11.53□□□□□ -0.56
SPG7-218ENST00000568205 VGLL1Q99990 258 aa11.53□□□□□ -0.56
SPG7-218ENST00000568205 TCEAL7Q9BRU2 100 aa11.53□□□□□ -0.56
SPG7-218ENST00000568205 AGPAT4-IT1Q9H0P7 198 aa11.53□□□□□ -0.56
SPG7-218ENST00000568205 SERTM2A0A1B0GWG4 89 aa11.52□□□□□ -0.57
SPG7-218ENST00000568205 C11orf94C9JXX5 98 aa11.52□□□□□ -0.57
SPG7-218ENST00000568205 PEX7O00628 323 aa11.52□□□□□ -0.57
SPG7-218ENST00000568205 CA1P00915 261 aaPredicted RBP11.52□□□□□ -0.57
SPG7-218ENST00000568205 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
SPG7-218ENST00000568205 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
SPG7-218ENST00000568205 TMEM78Q5T7P6 136 aa11.52□□□□□ -0.57
SPG7-218ENST00000568205 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms