RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	CLEC12B	Q2HXU8	276 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	LGALS9B	Q3B8N2	356 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	SLC25A53	Q5H9E4	307 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	GCSAML	Q5JQS6	135 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	FAM120AOS	Q5T036	256 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	TSPO2	Q5TGU0	170 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	LGALS9C	Q6DKI2	356 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	ZFAND6	Q6FIF0	208 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	ADAMTSL5	Q6ZMM2	481 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	PQLC2	Q6ZP29	291 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	DGAT2L6	Q6ZPD8	337 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	GAPT	Q8N292	157 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	ZNF611	Q8N823	705 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	GATD1	Q8NB37	220 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	OR1F12	Q8NHA8	337 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	OR2T6	Q8NHC8	308 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	CACNG8	Q8WXS5	425 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	ANAPC13	Q9BS18	74 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	MRPL32	Q9BYC8	188 aa	Known RBP	3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	RTN4R	Q9BZR6	473 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	SLC25A22	Q9H936	323 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	MTCH1	Q9NZJ7	389 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	LINC00312	Q9Y6C7	94 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	ZAN	Q9Y493	2812 aa		3.83	□□□□□ -1.8
CBFB-208	ENST00000567947	NF1	P21359	2839 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	FLNA	P21333	2647 aa	Known RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	AKAP6	Q13023	2319 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	ARID1A	O14497	2285 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	FREM1	Q5H8C1	2179 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	TMED7-TICAM2	A0A0A6YYA0	188 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	TRGV5	A0A0B4J1U4	118 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	KBTBD11-OT1	A0A1B0GTJ5	212 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947		A0A1B0GXF2	115 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947		F2Z2F3	143 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947		K7EN84	100 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	CCL21	O00585	134 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	UTS2	O95399	124 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	IGHG1	P01857	330 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	CT62	P0C5K7	136 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	SPINK8	P0C7L1	97 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947		P0C879	139 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	FABP6	P51161	128 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	DSCR4	P56555	118 aa	Predicted RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	RBM11	P57052	281 aa	Known RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	TAS2R45	P59539	299 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	PMP22	Q01453	160 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	C3AR1	Q16581	482 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	CEACAM16	Q2WEN9	425 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	DMRTC1	Q5HYR2	192 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	C10orf128	Q5T292	105 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	IBA57	Q5T440	356 aa	Known RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	OTP	Q5XKR4	325 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	LCN12	Q6JVE5	192 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	ZNF818P	Q6ZRF7	136 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	YRDC	Q86U90	279 aa	Known RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	PPP1R27	Q86WC6	154 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	PRR22	Q8IZ63	422 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	TEX29	Q8N6K0	151 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	PIGT	Q969N2	578 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	SPTSSA	Q969W0	71 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	PTH2	Q96A98	100 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	LINC01600	Q96MT4	127 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	OXGR1	Q96P68	337 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	SPAG8	Q99932	426 aa	Predicted RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	NXF5	Q9H1B4	397 aa	Known RBP	3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	CXXC4	Q9H2H0	198 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	MAP1LC3A	Q9H492	121 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	THYN1	Q9P016	225 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	CLCF1	Q9UBD9	225 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	CACNG5	Q9UF02	275 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947	FAM215A	Q9Y5M1	114 aa		3.82	□□□□□ -1.8
CBFB-208	ENST00000567947		A0A087X0K7	114 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	hCG_38984	A0A1B0GV85	526 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	PINLYP	A6NC86	204 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947		H3BSH0	61 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	STATH	P02808	62 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	PRSS1	P07477	247 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	GATA2	P23769	480 aa	Predicted RBP	3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	GCHFR	P30047	84 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	ATP5G3	P48201	142 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	B3GALT5-AS1	P59052	145 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	RPS28	P62857	69 aa	Known RBP	3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	HBB	P68871	147 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	MS4A18	Q3C1V0	323 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	SPANXN5	Q5MJ07	72 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	HIST2H2BD	Q6DRA6	164 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	KRTAP5-1	Q6L8H4	278 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947		Q6ZUT4	128 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	FAM19A2	Q8N3H0	131 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	LRRC29	Q8WV35	223 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	RNASE6	Q93091	150 aa	Known RBP	3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	ZNF524	Q96C55	264 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	BORCS8	Q96FH0	119 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	PERP	Q96FX8	193 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	COQ2	Q96H96	371 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	TPPP3	Q9BW30	176 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	SLC25A2	Q9BXI2	301 aa		3.81	□□□□□ -1.8
CBFB-208	ENST00000567947	HES7	Q9BYE0	225 aa		3.81	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms