RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 A6NN06 94 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 C17orf112F2Z3M2 114 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 H7BYZ3 331 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 RER1O15258 196 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 SLC16A4O15374 487 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 PDE6DO43924 150 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 BANF1O75531 89 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 HAND1O96004 215 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 IGHV3-30P01768 117 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 IGHV3-33P01772 117 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 APOEP02649 317 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 TCRBP04435 133 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 C8GP07360 202 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 SERPINA6P08185 405 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 RPS17P08708 135 aaKnown RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 NMBP08949 121 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 OCM2P0CE71 109 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 IGHV3-30-5P0DP03 117 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 HLA-EP13747 358 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 SPRR2BP35325 72 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 SRP14P37108 136 aaKnown RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 RAB5CP51148 216 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 VBP1P61758 197 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 SPAG11BQ08648 103 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 DIAPH2-AS1Q14236 149 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 HIST3H3Q16695 136 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 IQCJQ1A5X6 159 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 SPINK13Q1W4C9 94 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 IAH1Q2TAA2 248 aaPredicted RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 KRTAP6-2Q3LI66 62 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 VMA21Q3ZAQ7 101 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 OGFRL1Q5TC84 451 aaPredicted RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 LINC00299Q6ZSB3 139 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 FAM9CQ8IZT9 166 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 C10orf111Q8N326 155 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 OR10AG1Q8NH19 301 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 CCL4L1Q8NHW4 92 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 DDI1Q8WTU0 396 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 CT55Q8WUE5 264 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 NAT14Q8WUY8 206 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 CLEC2BQ92478 149 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 ARL5BQ96KC2 179 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 C2orf50Q96LR7 162 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 CARD19Q96LW7 228 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 Q96NJ1 140 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 DRC3Q9H069 523 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 TCEAL2Q9H3H9 227 aaPredicted RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 POPDC3Q9HBV1 291 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 TVP23BQ9NYZ1 205 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 GLTPQ9NZD2 209 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 CHMP5Q9NZZ3 219 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 BOKQ9UMX3 212 aaPredicted RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 LSM5Q9Y4Y9 91 aaKnown RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 ATP6V1DQ9Y5K8 247 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 PLXNA1Q9UIW2 1896 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 CELSR2Q9HCU4 2923 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 UBR5O95071 2799 aaPredicted RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 CDK13Q14004 1512 aaKnown RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 DLC1Q96QB1 1528 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 CAMSAP2Q08AD1 1489 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 ANKRD17O75179 2603 aaKnown RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 TECPR2O15040 1411 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 KIAA1107Q9UPP5 1409 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 LAMA5O15230 3695 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 DOCK4Q8N1I0 1966 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 ATG2AQ2TAZ0 1938 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 RTL9Q8NET4 1388 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 KMT2CQ8NEZ4 4911 aaKnown RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 A0A096LPI6 279 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 A0A0A6YYH2 397 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 C3orf85A0A1B0GTC6 90 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 A6NJ64 397 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 G3V318 75 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 HMGB3O15347 200 aaKnown RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 SULT1C4O75897 302 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 DCTN3O75935 186 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 CFDP00746 253 aaPredicted RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 IGF2P01344 180 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 TRGC2P03986 189 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 CSN2P05814 226 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 OR10J4P0C629 311 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 IL7P13232 177 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 FABP4P15090 132 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 NFYBP25208 207 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 ERP29P30040 261 aaKnown RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 TMBIM6P55061 237 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 ERVS71-1P61550 626 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 SNRPD3P62318 126 aaKnown RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 HAMPP81172 84 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 COX6A2Q02221 97 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 KLKP1Q107X0 134 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 EDDM3AQ14507 147 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 TAF1AQ15573 450 aaPredicted RBP-0.28□□□□□ -2.45
CDH1-211ENST00000567320 DEFB109BQ30KR1 87 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 AKIRIN2Q53H80 203 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 BCL2L15Q5TBC7 163 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 FAM74A4Q5TZK3 123 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 LYRM7Q5U5X0 104 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 HACD4Q5VWC8 232 aa-0.28□□□□□ -2.45
CDH1-211ENST00000567320 EIF5AL1Q6IS14 154 aaKnown RBP-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms