RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 STAG3L3P0CL85 134 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 LGALSLQ3ZCW2 172 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-208ENST00000567250 FAM74A1Q5RGS3 127 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 LYPD1Q8N2G4 141 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 OR4B1Q8NGF8 309 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
SF3B3-208ENST00000567250 TP53TG1Q9Y2A0 90 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 AGRNO00468 2067 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 HIST1H1AQ02539 215 aaPredicted RBP8.95□□□□□ -0.98
SF3B3-208ENST00000567250 DEFB135Q30KP9 77 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 GDF5OSQ5U4N7 250 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 IGFL4Q6B9Z1 124 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 RAB24Q969Q5 203 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 RCHY1Q96PM5 261 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 TMEM167BQ9NRX6 74 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 U3KQK5 164 aa8.95□□□□□ -0.98
SF3B3-208ENST00000567250 F6UB75 175 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 NDUFB4O95168 129 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 AMBPP02760 352 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 HLA-DMBP28068 263 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 CNN1P51911 297 aaKnown RBP8.94□□□□□ -0.98
SF3B3-208ENST00000567250 CD300CQ08708 224 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 SLC51BQ86UW2 128 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 C9orf62Q8N4C0 152 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 OR8A1Q8NGG7 326 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 OR10J6PQ8NGY7 276 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 ZNF503Q96F45 646 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 PHYHIPLQ96FC7 376 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 PPP1R14DQ9NXH3 145 aa8.94□□□□□ -0.98
SF3B3-208ENST00000567250 A6NJY4 79 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 A8MTW9 85 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 HMGB3O15347 200 aaKnown RBP8.93□□□□□ -0.98
SF3B3-208ENST00000567250 SPRY2O43597 315 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 IGKV3-20P01619 116 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 CSN1S1P47710 185 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 DEFB1P60022 68 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 ICAM4Q14773 271 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 IQCF2Q8IXL9 164 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 TMED6Q8WW62 240 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 Q9H3A6 140 aa8.93□□□□□ -0.98
SF3B3-208ENST00000567250 MAP1LC3B2A6NCE7 125 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 BOLA2-SMG1P6H3BVE0 249 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 GCHFRP30047 84 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 RAB5CP51148 216 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 RANP62826 216 aaKnown RBP8.92□□□□□ -0.98
SF3B3-208ENST00000567250 EXOC3-AS1Q8N2X6 119 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 CMTM2Q8TAZ6 248 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 RXFP4Q8TDU9 374 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 RNF183Q96D59 192 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 MAP1LC3BQ9GZQ8 125 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 RETNQ9HD89 108 aa8.92□□□□□ -0.98
SF3B3-208ENST00000567250 NBEAL2Q6ZNJ1 2754 aa8.91□□□□□ -0.98
SF3B3-208ENST00000567250 ZNF705FA8MVS1 300 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-208ENST00000567250 M0R3E3 92 aa8.91□□□□□ -0.98
SF3B3-208ENST00000567250 EIF3GO75821 320 aaKnown RBP eCLIP8.91□□□□□ -0.98
SF3B3-208ENST00000567250 ZNF726P1Q15940 193 aa8.91□□□□□ -0.98
SF3B3-208ENST00000567250 FAM213BQ8TBF2 198 aa8.91□□□□□ -0.98
SF3B3-208ENST00000567250 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
SF3B3-208ENST00000567250 NPIPB6E9PJ23 425 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 TEX46H3BTG2 121 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 LCE2BO14633 110 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 INSP01308 110 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 ZNF705DP0CH99 300 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-208ENST00000567250 ZNF705BP0CI00 300 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-208ENST00000567250 TSPOP30536 169 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 TMEM78Q5T7P6 136 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 SSX7Q7RTT5 188 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 ARL6IP6Q8N6S5 226 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 SUN5Q8TC36 379 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 ODF3Q96PU9 254 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 OVOL2Q9BRP0 275 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 SLC35B3Q9H1N7 401 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
SF3B3-208ENST00000567250 SERTM2A0A1B0GWG4 89 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 SLC25A5P05141 298 aaKnown RBP8.89□□□□□ -0.99
SF3B3-208ENST00000567250 CDKN1BP46527 198 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 AMTNQ6UX39 209 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 C5orf17Q8NAS9 161 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 RARRES2Q99969 163 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 NKX6-2Q9C056 277 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-208ENST00000567250 XCL2Q9UBD3 114 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 GOLT1BQ9Y3E0 138 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 ARL2-SNX15V9GYD0 113 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
SF3B3-208ENST00000567250 A0A1W2PRE2 83 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 PGPA6NDG6 321 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 K7EQM0 130 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 GIG44P09565 113 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-208ENST00000567250 H2AFB1P0C5Y9 115 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 LEPP41159 167 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 SULT1A2P50226 295 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 PPT1P50897 306 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-208ENST00000567250 FXYD7P58549 80 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 SPINK13Q1W4C9 94 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 OR11H2Q8NH07 326 aa8.88□□□□□ -0.99
SF3B3-208ENST00000567250 SFT2D1Q8WV19 159 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms