RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 WDR87Q6ZQQ6 2873 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 SMIM5Q71RC9 77 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 ANKARQ7Z5J8 1434 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 DOCK4Q8N1I0 1966 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 TMEM106AQ96A25 262 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 LXNQ9BS40 222 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 ADAT1Q9BUB4 502 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 NPCDR1Q9BY65 106 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 TMEM133Q9H2Q1 129 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 CALML5Q9NZT1 146 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 SETD2Q9BYW2 2564 aaPredicted RBP2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 PLXNB1O43157 2135 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 CROCCQ5TZA2 2017 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 CACNA1SQ13698 1873 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 ARFGEF2Q9Y6D5 1785 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 IGHV3-15A0A0B4J1V0 119 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 IGKV1-9A0A0C4DH69 117 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 COLCA2A8K830 154 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 K7EP13 123 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 K7ERJ3 54 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 K7ERU9 68 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 NDUFB3O43676 98 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 GGCTO75223 188 aaKnown RBP2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 APOC1P02654 83 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 PAEPP09466 180 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 RAB5CP51148 216 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 DNAJB13P59910 316 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 PSG9Q00887 426 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 VMA21Q3ZAQ7 101 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 TMEM244Q5VVB8 128 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 EIF5AL1Q6IS14 154 aaKnown RBP2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 TMEM136Q6ZRR5 245 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 LINC00305Q7Z4B0 112 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 PRR15Q8IV56 129 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 RPRMLQ8N4K4 120 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 SIGLECL1Q8N7X8 197 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 Q8N9L7 120 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 OR4K15Q8NH41 348 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 TP53RKQ96S44 253 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 TCEAL2Q9H3H9 227 aaPredicted RBP2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 DUSP21Q9H596 190 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 KLK12Q9UKR0 248 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 EPDR1Q9UM22 224 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 CACNA1HO95180 2353 aa2.03□□□□□ -2.08
HERPUD1-211ENST00000566550 SMG1Q96Q15 3661 aaKnown RBP2.03□□□□□ -2.09
HERPUD1-211ENST00000566550 NACAE9PAV3 2078 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 POLQO75417 2590 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 IGKV2D-24A0A075B6R9 120 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 TRAV40A0A0B4J280 105 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 TMEM212A6NML5 194 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 J3QR89 54 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 UCHL1P09936 223 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 DNAH10OSP0CZ25 163 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 ZNF728P0DKX0 622 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 HBBP68871 147 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 FOXF1Q12946 379 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 SOSTDC1Q6X4U4 206 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 LHFPL1Q86WI0 220 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 PDZD9Q8IXQ8 264 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 WFDC11Q8NEX6 87 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 OR51A4Q8NGJ6 313 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 YPEL2Q96QA6 119 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 LPAR5Q9H1C0 372 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 RNF122Q9H9V4 155 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 BAIAP2Q9UQB8 552 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 SPG11Q96JI7 2443 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 FRYQ5TBA9 3013 aa2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 FAM208AQ9UK61 1670 aaKnown RBP2.02□□□□□ -2.09
HERPUD1-211ENST00000566550 CREBBPQ92793 2442 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 CEP162Q5TB80 1403 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 PCNX1Q96RV3 2341 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 IBTKQ9P2D0 1353 aaPredicted RBP2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 LAMB1P07942 1786 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 DDX60LQ5H9U9 1706 aaKnown RBP2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 MEIKINA0A087WXM9 373 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 TRGV10A0A0A0MS01 117 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 TRAV13-1A0A0B4J241 112 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 LOC107984640A0A0U1RRK4 108 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 TMEM235A6NFC5 223 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 H3BMG7 143 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 RPL36A-HNRNPH2H7BZ11 118 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 J3QQQ9 107 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 GNRH2O43555 120 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 SYNGR2O43760 224 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 GNG7O60262 68 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 PGLYRP1O75594 196 aaPredicted RBP2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 MT-ND6P03923 174 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 MSMBP08118 114 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 SCTP09683 121 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 CRYGAP11844 174 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 RRAS2P62070 204 aaPredicted RBP2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 Q6P435 159 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 Q6ZS52 159 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 SLC35E3Q7Z769 313 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 LRRC28Q86X40 367 aaPredicted RBP2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 C10orf126Q8N4M7 172 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 Q8NAQ8 132 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 PRADC1Q9BSG0 188 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms