RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 C9orf118A6NHY6 69 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 SMAD7O15105 426 aaKnown RBP16.97■□□□□ 0.31
SPSB3-208ENST00000566339 CNIH1O95406 144 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 IL4P05112 153 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 MFAP4P55083 255 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 LDLRAD2Q5SZI1 272 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 LYZL1Q6UWQ5 148 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 ICE1Q9Y2F5 2266 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 PPIAL4CA0A0B4J2A2 164 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 D6R8Y8 96 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 NBR2O15453 112 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 APELAP0DMC3 54 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 PPIAL4GP0DN37 164 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 RPL7P18124 248 aaKnown RBP16.96■□□□□ 0.31
SPSB3-208ENST00000566339 C17orf77Q96MU5 243 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 TP73-AS1Q9UF72 201 aa16.96■□□□□ 0.31
SPSB3-208ENST00000566339 NAV3Q8IVL0 2385 aa16.96■□□□□ 0.3
SPSB3-208ENST00000566339 GAGE12BA1L429 117 aa16.95■□□□□ 0.3
SPSB3-208ENST00000566339 SH2D1AO60880 128 aa16.95■□□□□ 0.3
SPSB3-208ENST00000566339 NCR2O95944 276 aa16.95■□□□□ 0.3
SPSB3-208ENST00000566339 PRR31Q5SQ13 230 aa16.95■□□□□ 0.3
SPSB3-208ENST00000566339 UFSP1Q6NVU6 142 aa16.95■□□□□ 0.3
SPSB3-208ENST00000566339 LY6G5BQ8NDX9 201 aa16.95■□□□□ 0.3
SPSB3-208ENST00000566339 AP1S3Q96PC3 154 aa16.95■□□□□ 0.3
SPSB3-208ENST00000566339 SPENQ96T58 3664 aaKnown RBP16.95■□□□□ 0.3
SPSB3-208ENST00000566339 TRAV8-6A0A0B4J262 113 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 A1L4Q6 167 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 H0Y8G0 127 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 FCGR2BP31994 310 aaPredicted RBP16.94■□□□□ 0.3
SPSB3-208ENST00000566339 COL6A6A6NMZ7 2263 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 GAGE10A6NGK3 116 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 GNG7O60262 68 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 MRPL51Q4U2R6 128 aaKnown RBP16.94■□□□□ 0.3
SPSB3-208ENST00000566339 OR11H6Q8NGC7 330 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 CNFNQ9BYD5 112 aa16.94■□□□□ 0.3
SPSB3-208ENST00000566339 TLN1Q9Y490 2541 aaKnown RBP16.94■□□□□ 0.3
SPSB3-208ENST00000566339 ZNF462Q96JM2 2506 aa16.93■□□□□ 0.3
SPSB3-208ENST00000566339 ZNF843Q8N446 348 aa16.93■□□□□ 0.3
SPSB3-208ENST00000566339 OR8A1Q8NGG7 326 aa16.93■□□□□ 0.3
SPSB3-208ENST00000566339 IFI27L1Q96BM0 104 aa16.93■□□□□ 0.3
SPSB3-208ENST00000566339 RABAC1Q9UI14 185 aa16.93■□□□□ 0.3
SPSB3-208ENST00000566339 GCN1Q92616 2671 aaKnown RBP16.93■□□□□ 0.3
SPSB3-208ENST00000566339 IGLV11-55A0A075B6I3 123 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 IGLC6P0CF74 106 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 MCRIP2Q9BUT9 160 aaKnown RBP16.92■□□□□ 0.3
SPSB3-208ENST00000566339 DPM3Q9P2X0 92 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 RNF151Q2KHN1 245 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 PIP4P2Q8N4L2 257 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 C8orf49Q96NF6 230 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 PRR25Q96S07 402 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 VPS25Q9BRG1 176 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 THYN1Q9P016 225 aa16.92■□□□□ 0.3
SPSB3-208ENST00000566339 SPTA1P02549 2419 aa16.91■□□□□ 0.3
SPSB3-208ENST00000566339 AMN1Q8IY45 258 aa16.91■□□□□ 0.3
SPSB3-208ENST00000566339 FER1L6-AS1Q8NA97 138 aa16.91■□□□□ 0.3
SPSB3-208ENST00000566339 OR5A1Q8NGJ0 315 aa16.91■□□□□ 0.3
SPSB3-208ENST00000566339 TIMM23O14925 209 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 CD3EP07766 207 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 COX7A1P24310 79 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 GFRALQ6UXV0 394 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 Q71RC1 249 aaPredicted RBP16.9■□□□□ 0.3
SPSB3-208ENST00000566339 TTC9CQ8N5M4 171 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 CFHR4Q92496 578 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 HIGD1BQ9P298 99 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 BAHCC1Q9P281 2608 aa16.9■□□□□ 0.3
SPSB3-208ENST00000566339 K7EP34 96 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 M0R3E3 92 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 HLA-DRB4P13762 266 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 CKS2P33552 79 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 CACNG7P62955 275 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 ADAMTSL5Q6ZMM2 481 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 Q8NA96 180 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 TPPP3Q9BW30 176 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 HLA-DRB4X5D2U9 266 aa16.89■□□□□ 0.3
SPSB3-208ENST00000566339 TMEM213A2RRL7 107 aa16.89■□□□□ 0.29
SPSB3-208ENST00000566339 MAP1LC3AQ9H492 121 aa16.89■□□□□ 0.29
SPSB3-208ENST00000566339 NXT2Q9NPJ8 142 aaKnown RBP16.89■□□□□ 0.29
SPSB3-208ENST00000566339 SMPXQ9UHP9 88 aa16.89■□□□□ 0.29
SPSB3-208ENST00000566339 TIMM8BQ9Y5J9 83 aaPredicted RBP16.89■□□□□ 0.29
SPSB3-208ENST00000566339 HELZ2Q9BYK8 2649 aaKnown RBP16.89■□□□□ 0.29
SPSB3-208ENST00000566339 OOSP1A8MZH6 123 aa16.88■□□□□ 0.29
SPSB3-208ENST00000566339 M0R1W7 72 aa16.88■□□□□ 0.29
SPSB3-208ENST00000566339 RAB9AP51151 201 aa16.88■□□□□ 0.29
SPSB3-208ENST00000566339 C5orf64Q2M2E5 130 aa16.88■□□□□ 0.29
SPSB3-208ENST00000566339 ZNF562Q6V9R5 426 aa16.88■□□□□ 0.29
SPSB3-208ENST00000566339 FANCD2OSQ96PS1 177 aa16.88■□□□□ 0.29
SPSB3-208ENST00000566339 FAM106CPP0CH98 169 aa16.87■□□□□ 0.29
SPSB3-208ENST00000566339 LOXL1Q08397 574 aaPredicted RBP16.87■□□□□ 0.29
SPSB3-208ENST00000566339 FAM106AQ4KMX7 169 aa16.87■□□□□ 0.29
SPSB3-208ENST00000566339 ZGRF1Q86YA3 2104 aa16.87■□□□□ 0.29
SPSB3-208ENST00000566339 LOC389332A0A1B0GUA5 103 aa16.87■□□□□ 0.29
SPSB3-208ENST00000566339 NDUFS7O75251 213 aa16.87■□□□□ 0.29
SPSB3-208ENST00000566339 ZMAT4Q9H898 229 aa16.87■□□□□ 0.29
SPSB3-208ENST00000566339 C21orf62Q9NYP8 219 aa16.87■□□□□ 0.29
SPSB3-208ENST00000566339 RBAKDNA6NC62 111 aa16.86■□□□□ 0.29
SPSB3-208ENST00000566339 EGR2P11161 476 aaPredicted RBP16.85■□□□□ 0.29
SPSB3-208ENST00000566339 FCER1GP30273 86 aa16.85■□□□□ 0.29
SPSB3-208ENST00000566339 KIR3DS1Q14943 382 aa16.85■□□□□ 0.29
SPSB3-208ENST00000566339 ERASQ7Z444 233 aa16.85■□□□□ 0.29
SPSB3-208ENST00000566339 ODF3BA8MYP8 253 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms