RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
USB1-213ENST00000566292 LYRM2Q9NU23 88 aaPredicted RBP12.86□□□□□ -0.35
USB1-213ENST00000566292 PXMP4Q9Y6I8 212 aa12.86□□□□□ -0.35
USB1-213ENST00000566292 UBE2L5PA0A1B0GUS4 154 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 CBY3A6NI87 242 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 ATP5G1P05496 136 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 PVALBP20472 110 aaPredicted RBP12.85□□□□□ -0.35
USB1-213ENST00000566292 ATP5G3P48201 142 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 SULT1A1P50225 295 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 TMEM252Q8N6L7 170 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 OR10J6PQ8NGY7 276 aa12.85□□□□□ -0.35
USB1-213ENST00000566292 TMEM263Q8WUH6 116 aaKnown RBP12.85□□□□□ -0.35
USB1-213ENST00000566292 TIMM8BQ9Y5J9 83 aaPredicted RBP12.85□□□□□ -0.35
USB1-213ENST00000566292 H7BYZ3 331 aa12.84□□□□□ -0.35
USB1-213ENST00000566292 RPL29P47914 159 aaKnown RBP12.84□□□□□ -0.35
USB1-213ENST00000566292 GFI1BQ5VTD9 330 aa12.84□□□□□ -0.35
USB1-213ENST00000566292 ZNF493Q6ZR52 646 aa12.84□□□□□ -0.35
USB1-213ENST00000566292 C20orf144Q9BQM9 153 aa12.84□□□□□ -0.35
USB1-213ENST00000566292 NOP10Q9NPE3 64 aaKnown RBP12.84□□□□□ -0.35
USB1-213ENST00000566292 SLC39A9Q9NUM3 307 aa12.84□□□□□ -0.35
USB1-213ENST00000566292 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
USB1-213ENST00000566292 FAM240BA0A1B0GVZ2 78 aa12.83□□□□□ -0.36
USB1-213ENST00000566292 S100A11P31949 105 aa12.83□□□□□ -0.36
USB1-213ENST00000566292 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
USB1-213ENST00000566292 BAXQ07812 192 aa12.83□□□□□ -0.36
USB1-213ENST00000566292 PFDN5Q99471 154 aa12.83□□□□□ -0.36
USB1-213ENST00000566292 NUDT3O95989 172 aa12.82□□□□□ -0.36
USB1-213ENST00000566292 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
USB1-213ENST00000566292 GUK1Q16774 197 aa12.82□□□□□ -0.36
USB1-213ENST00000566292 CHAC2Q8WUX2 184 aa12.82□□□□□ -0.36
USB1-213ENST00000566292 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
USB1-213ENST00000566292 NPIPB6E9PJ23 425 aa12.81□□□□□ -0.36
USB1-213ENST00000566292 J3KRW8 73 aa12.81□□□□□ -0.36
USB1-213ENST00000566292 C1orf134Q5TEV5 83 aa12.81□□□□□ -0.36
USB1-213ENST00000566292 STX12Q86Y82 276 aa12.81□□□□□ -0.36
USB1-213ENST00000566292 LINC00612Q8N6U2 182 aa12.81□□□□□ -0.36
USB1-213ENST00000566292 RNF141Q8WVD5 230 aa12.81□□□□□ -0.36
USB1-213ENST00000566292 ODF3Q96PU9 254 aa12.81□□□□□ -0.36
USB1-213ENST00000566292 ZNF253O75346 499 aa12.8□□□□□ -0.36
USB1-213ENST00000566292 FGF7P21781 194 aa12.8□□□□□ -0.36
USB1-213ENST00000566292 HBG1P69891 147 aa12.8□□□□□ -0.36
USB1-213ENST00000566292 HBG2P69892 147 aa12.8□□□□□ -0.36
USB1-213ENST00000566292 ASAH1Q13510 395 aa12.8□□□□□ -0.36
USB1-213ENST00000566292 ZNRF2Q8NHG8 242 aa12.8□□□□□ -0.36
USB1-213ENST00000566292 GPN1Q9HCN4 374 aaPredicted RBP12.8□□□□□ -0.36
USB1-213ENST00000566292 PCLOQ9Y6V0 5065 aa12.8□□□□□ -0.36
USB1-213ENST00000566292 MUC4Q99102 2169 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 M0R3E3 92 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 NDUFB4O95168 129 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 LEPP41159 167 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 ATP6V1FQ16864 119 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 GCSAMLQ5JQS6 135 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 SOHLH1Q5JUK2 328 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 MZT2BQ6NZ67 158 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 LINC00299Q6ZSB3 139 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 TMEM14CQ9P0S9 112 aa12.79□□□□□ -0.36
USB1-213ENST00000566292 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
USB1-213ENST00000566292 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
USB1-213ENST00000566292 PYYP10082 97 aa12.78□□□□□ -0.36
USB1-213ENST00000566292 ERCC8Q13216 396 aa12.78□□□□□ -0.36
USB1-213ENST00000566292 CCDC28AQ8IWP9 274 aa12.78□□□□□ -0.36
USB1-213ENST00000566292 MRPL53Q96EL3 112 aaKnown RBP12.78□□□□□ -0.36
USB1-213ENST00000566292 NPCDR1Q9BY65 106 aa12.78□□□□□ -0.36
USB1-213ENST00000566292 LINC00588Q9Y4M8 146 aa12.78□□□□□ -0.36
USB1-213ENST00000566292 SIX6O95475 246 aa12.77□□□□□ -0.37
USB1-213ENST00000566292 HIST1H1EP10412 219 aaKnown RBP12.77□□□□□ -0.37
USB1-213ENST00000566292 NHLH2Q02577 135 aa12.77□□□□□ -0.37
USB1-213ENST00000566292 NBDYA0A0U1RRE5 68 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 GAGE12BA1L429 117 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 MPDU1O75352 247 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 GAGE7O76087 117 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 HOXA5P20719 270 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 CCL18P55774 89 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 OR5I1Q13606 314 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 S100ZQ8WXG8 99 aa12.76□□□□□ -0.37
USB1-213ENST00000566292 SNURFLB1AK76 121 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 RLN2P04090 185 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 SLC25A5P05141 298 aaKnown RBP12.75□□□□□ -0.37
USB1-213ENST00000566292 PDE6HQ13956 83 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 EXOC3-AS1Q8N2X6 119 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 OR5C1Q8NGR4 320 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 THAP6Q8TBB0 222 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 BLNKQ8WV28 456 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 FAM167A-AS1Q96KT0 104 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 PYGO2Q9BRQ0 406 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 SLC25A2Q9BXI2 301 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 OR5AC2Q9NZP5 309 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 PRELID1Q9Y255 219 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 TIMM9Q9Y5J7 89 aa12.75□□□□□ -0.37
USB1-213ENST00000566292 TRAV26-1A0A087WT03 109 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 C7orf71A4D174 169 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 KLLNB2CW77 178 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 H0YIZ8 118 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 CLINT1Q14677 625 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms