RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 NEU1Q99519 415 aa13.09□□□□□ -0.31
TRADD-205ENST00000566247 PRELID1Q9Y255 219 aa13.09□□□□□ -0.31
TRADD-205ENST00000566247 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 A0A1W2PPV4 95 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 SMIM9A6NGZ8 99 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 NDUFB4O95168 129 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 NBEAP1P0C6P0 100 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 UBE2L3P68036 154 aaKnown RBP13.08□□□□□ -0.32
TRADD-205ENST00000566247 BAP18Q8IXM2 172 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 RNF141Q8WVD5 230 aa13.08□□□□□ -0.32
TRADD-205ENST00000566247 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
TRADD-205ENST00000566247 TRAV12-2A0A075B6T6 113 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 HBE1P02100 147 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 RAB2AP61019 212 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 FAM122CQ6P4D5 195 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 C1orf158Q8N1D5 194 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 EXOC3-AS1Q8N2X6 119 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 OR10G4Q8NGN3 311 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 OR10G9Q8NGN4 311 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 OR10G7Q8NGN6 311 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 FXYD5Q96DB9 178 aa13.07□□□□□ -0.32
TRADD-205ENST00000566247 SMLR1H3BR10 107 aa13.06□□□□□ -0.32
TRADD-205ENST00000566247 M0R3E3 92 aa13.06□□□□□ -0.32
TRADD-205ENST00000566247 ARPC5O15511 151 aa13.06□□□□□ -0.32
TRADD-205ENST00000566247 ATP6V0CP27449 155 aa13.06□□□□□ -0.32
TRADD-205ENST00000566247 TSPOP30536 169 aa13.06□□□□□ -0.32
TRADD-205ENST00000566247 EMP1P54849 157 aa13.06□□□□□ -0.32
TRADD-205ENST00000566247 ICAM4Q14773 271 aa13.06□□□□□ -0.32
TRADD-205ENST00000566247 CEMP1Q6PRD7 247 aaPredicted RBP13.06□□□□□ -0.32
TRADD-205ENST00000566247 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
TRADD-205ENST00000566247 PSMG3Q9BT73 122 aaPredicted RBP13.06□□□□□ -0.32
TRADD-205ENST00000566247 KLK5Q9Y337 293 aaPredicted RBP13.06□□□□□ -0.32
TRADD-205ENST00000566247 TMEM189A5PLL7 270 aa13.05□□□□□ -0.32
TRADD-205ENST00000566247 G3V3Q6 166 aa13.05□□□□□ -0.32
TRADD-205ENST00000566247 CRXO43186 299 aaPredicted RBP13.05□□□□□ -0.32
TRADD-205ENST00000566247 CDKN1BP46527 198 aa13.05□□□□□ -0.32
TRADD-205ENST00000566247 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
TRADD-205ENST00000566247 RPL7L1Q6DKI1 246 aaKnown RBP13.05□□□□□ -0.32
TRADD-205ENST00000566247 OR2G3Q8NGZ4 309 aa13.05□□□□□ -0.32
TRADD-205ENST00000566247 PHYHIPLQ96FC7 376 aa13.05□□□□□ -0.32
TRADD-205ENST00000566247 NPIPB6E9PJ23 425 aa13.04□□□□□ -0.32
TRADD-205ENST00000566247 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRADD-205ENST00000566247 RPP25LQ8N5L8 163 aaKnown RBP13.04□□□□□ -0.32
TRADD-205ENST00000566247 GNPNAT1Q96EK6 184 aaPredicted RBP13.04□□□□□ -0.32
TRADD-205ENST00000566247 ZNF503Q96F45 646 aa13.04□□□□□ -0.32
TRADD-205ENST00000566247 LOC102723971A0A1B0GUV8 181 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 JTBO76095 146 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 MBP02144 154 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 LEPP41159 167 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 CDC34P49427 236 aaPredicted RBP13.03□□□□□ -0.32
TRADD-205ENST00000566247 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
TRADD-205ENST00000566247 SERF2P84101 59 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 PQLC2Q6ZP29 291 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 LINC01587Q99440 93 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 SH3BGRL3Q9H299 93 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 CELA1Q9UNI1 258 aa13.03□□□□□ -0.32
TRADD-205ENST00000566247 STARD9Q9P2P6 4700 aa13.02□□□□□ -0.32
TRADD-205ENST00000566247 J3KRW8 73 aa13.02□□□□□ -0.33
TRADD-205ENST00000566247 TAAR5O14804 337 aa13.02□□□□□ -0.33
TRADD-205ENST00000566247 HMGB3O15347 200 aaKnown RBP13.02□□□□□ -0.33
TRADD-205ENST00000566247 CSN1S1P47710 185 aa13.02□□□□□ -0.33
TRADD-205ENST00000566247 ERCC8Q13216 396 aa13.02□□□□□ -0.33
TRADD-205ENST00000566247 TMEM256Q8N2U0 113 aa13.02□□□□□ -0.33
TRADD-205ENST00000566247 Q9H3A6 140 aa13.02□□□□□ -0.33
TRADD-205ENST00000566247 LCE6AA0A183 80 aa13.01□□□□□ -0.33
TRADD-205ENST00000566247 ZNF705GA8MUZ8 300 aaPredicted RBP13.01□□□□□ -0.33
TRADD-205ENST00000566247 SPART-AS1P0CW21 52 aa13.01□□□□□ -0.33
TRADD-205ENST00000566247 CT45A10P0DMU9 189 aa13.01□□□□□ -0.33
TRADD-205ENST00000566247 LYPD1Q8N2G4 141 aa13.01□□□□□ -0.33
TRADD-205ENST00000566247 ODF3Q96PU9 254 aa13.01□□□□□ -0.33
TRADD-205ENST00000566247 IGKV2-40A0A087WW87 121 aaPredicted RBP13□□□□□ -0.33
TRADD-205ENST00000566247 TEX48A0A1B0GUV7 120 aa13□□□□□ -0.33
TRADD-205ENST00000566247 C11orf94C9JXX5 98 aa13□□□□□ -0.33
TRADD-205ENST00000566247 IGKV2D-40P01614 121 aaPredicted RBP13□□□□□ -0.33
TRADD-205ENST00000566247 TMEM78Q5T7P6 136 aa13□□□□□ -0.33
TRADD-205ENST00000566247 Q6ZTC4 211 aa13□□□□□ -0.33
TRADD-205ENST00000566247 ZNF767PQ75MW2 155 aa13□□□□□ -0.33
TRADD-205ENST00000566247 LINC00477Q96M19 166 aa13□□□□□ -0.33
TRADD-205ENST00000566247 CSMD3Q7Z407 3707 aa13□□□□□ -0.33
TRADD-205ENST00000566247 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
TRADD-205ENST00000566247 ARL14EPLP0DKL9 152 aa12.99□□□□□ -0.33
TRADD-205ENST00000566247 HTN1P15515 57 aa12.99□□□□□ -0.33
TRADD-205ENST00000566247 FAM74A1Q5RGS3 127 aa12.99□□□□□ -0.33
TRADD-205ENST00000566247 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
TRADD-205ENST00000566247 RAB24Q969Q5 203 aa12.99□□□□□ -0.33
TRADD-205ENST00000566247 C20orf144Q9BQM9 153 aa12.99□□□□□ -0.33
TRADD-205ENST00000566247 ACTR3CQ9C0K3 210 aaPredicted RBP12.99□□□□□ -0.33
TRADD-205ENST00000566247 YTHDF2Q9Y5A9 579 aaKnown RBP12.99□□□□□ -0.33
TRADD-205ENST00000566247 TRAV10A0A0B4J240 114 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 H7BYZ3 331 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 TAS2R60P59551 318 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 CMTM2Q8TAZ6 248 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 HYLS1Q96M11 299 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 ARPC5LQ9BPX5 153 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 AGPAT4-IT1Q9H0P7 198 aa12.98□□□□□ -0.33
TRADD-205ENST00000566247 PRM2P04554 102 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms