RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 HPGDSO60760 199 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 PGLYRP1O75594 196 aaPredicted RBP5.51□□□□□ -1.53
SMPD3-206ENST00000566009 RLN1P04808 185 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 SLC25A4P12235 298 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 HLA-DMAP28067 261 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 TCL1AP56279 114 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 TAS2R46P59540 309 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 TSPAN5P62079 268 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 CNBPP62633 177 aaKnown RBP5.51□□□□□ -1.53
SMPD3-206ENST00000566009 H2BFWTQ7Z2G1 175 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 GPX8Q8TED1 209 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 ZNF479Q96JC4 524 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 SLC25A32Q9H2D1 315 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 ANAPC10Q9UM13 185 aa5.51□□□□□ -1.53
SMPD3-206ENST00000566009 J3KRW8 73 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 GPR31O00270 319 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 GABARAPO95166 117 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 PRSS1P07477 247 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 CFC1BP0CG36 223 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 MEF2DQ14814 521 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 CCDC190Q86UF4 302 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 TMEM17Q86X19 198 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 SNX29P2Q8IUI4 249 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 SLC35G3Q8N808 338 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 CCDC71LQ8N9Z2 235 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 SPACA4Q8TDM5 124 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 AP3S1Q92572 193 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 SEC22AQ96IW7 307 aa5.5□□□□□ -1.53
SMPD3-206ENST00000566009 ATG12O94817 140 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
SMPD3-206ENST00000566009 S100GP29377 79 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 HRH1P35367 487 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 UCP3P55916 312 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 RPL19P84098 196 aaKnown RBP5.49□□□□□ -1.53
SMPD3-206ENST00000566009 BSXQ3C1V8 233 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 RAB2BQ8WUD1 216 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 C15orf40Q8WUR7 153 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 CHAC2Q8WUX2 184 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 ACY3Q96HD9 319 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 SLC25A22Q9H936 323 aa5.49□□□□□ -1.53
SMPD3-206ENST00000566009 RCVRNP35243 200 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 LYZP61626 148 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 IZUMO4Q1ZYL8 232 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 ANXA2RQ3ZCQ2 193 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 NOXA1Q86UR1 476 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 ARRDC1Q8N5I2 433 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 ZBTB8BQ8NAP8 495 aaPredicted RBP5.48□□□□□ -1.53
SMPD3-206ENST00000566009 Q8TAT8 98 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 DYNC2LI1Q8TCX1 351 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 ZNF431Q8TF32 576 aaPredicted RBP5.48□□□□□ -1.53
SMPD3-206ENST00000566009 C2orf50Q96LR7 162 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 EXTL2Q9UBQ6 330 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 USH2AO75445 5202 aa5.48□□□□□ -1.53
SMPD3-206ENST00000566009 USP17L23D6RBM5 183 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 CTDSP2O14595 271 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 RGS5O15539 181 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 PFN1P07737 140 aaKnown RBP5.47□□□□□ -1.53
SMPD3-206ENST00000566009 CXCL3P19876 107 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 HTR2BP41595 481 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 ZNF90Q03938 601 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 PHLDA2Q53GA4 152 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 STEAP1BQ6NZ63 245 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 TBC1D26Q86UD7 250 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 EIF4E3Q8N5X7 224 aaKnown RBP5.47□□□□□ -1.53
SMPD3-206ENST00000566009 OR52I2Q8NH67 350 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 BCL7BQ9BQE9 202 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 MTFP1Q9UDX5 166 aa5.47□□□□□ -1.53
SMPD3-206ENST00000566009 IGKV1-39P01597 117 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 CD3DP04234 171 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 IGKV1D-39P04432 117 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 CRYGAP11844 174 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 VWC2Q2TAL6 325 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 RNASE10Q5GAN6 216 aaKnown RBP5.46□□□□□ -1.54
SMPD3-206ENST00000566009 ETFRF1Q6IPR1 90 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 TMEM229BQ8NBD8 167 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 OR4D5Q8NGN0 318 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 OR10G4Q8NGN3 311 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 TERB2Q8NHR7 220 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 ZFAND1Q8TCF1 268 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 RNASEH2CQ8TDP1 164 aaKnown RBP5.46□□□□□ -1.54
SMPD3-206ENST00000566009 RPUSD4Q96CM3 377 aaKnown RBP5.46□□□□□ -1.54
SMPD3-206ENST00000566009 ZNF486Q96H40 463 aaPredicted RBP5.46□□□□□ -1.54
SMPD3-206ENST00000566009 SLIRPQ9GZT3 109 aaKnown RBP5.46□□□□□ -1.54
SMPD3-206ENST00000566009 FXYD6Q9H0Q3 95 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 MIXL1Q9H2W2 232 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 CDIP1Q9H305 208 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 ENY2Q9NPA8 101 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 RABL2AQ9UBK7 228 aaPredicted RBP5.46□□□□□ -1.54
SMPD3-206ENST00000566009 RABL2BQ9UNT1 228 aa5.46□□□□□ -1.54
SMPD3-206ENST00000566009 SNRPGP15A8MWD9 76 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 GABARAPH6UMI1 98 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 RAB3DO95716 219 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 PGAM2P15259 253 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 TBPP20226 339 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 TAS2R19P59542 299 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 RND3P61587 244 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 MRPS10P82664 201 aaKnown RBP5.45□□□□□ -1.54
SMPD3-206ENST00000566009 IFITM3Q01628 133 aa5.45□□□□□ -1.54
SMPD3-206ENST00000566009 SSBP1Q04837 148 aaKnown RBP5.45□□□□□ -1.54
SMPD3-206ENST00000566009 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms