RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ZNF575Q86XF7 245 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 RNF141Q8WVD5 230 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 DNAJC4Q9NNZ3 241 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 UQCC1Q9NVA1 299 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 ZNF586Q9NXT0 402 aa16.6■□□□□ 0.25
RAB40C-209ENST00000565511 CBY3A6NI87 242 aa16.59■□□□□ 0.25
RAB40C-209ENST00000565511 J3KRW8 73 aa16.59■□□□□ 0.25
RAB40C-209ENST00000565511 CT45A10P0DMU9 189 aa16.59■□□□□ 0.25
RAB40C-209ENST00000565511 S100A10P60903 97 aa16.59■□□□□ 0.25
RAB40C-209ENST00000565511 RAB32Q13637 225 aa16.59■□□□□ 0.25
RAB40C-209ENST00000565511 ZNRF2Q8NHG8 242 aa16.59■□□□□ 0.25
RAB40C-209ENST00000565511 TMEM263Q8WUH6 116 aaKnown RBP16.59■□□□□ 0.25
RAB40C-209ENST00000565511 RNF24Q9Y225 148 aa16.59■□□□□ 0.25
RAB40C-209ENST00000565511 TIMM8BQ9Y5J9 83 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-209ENST00000565511 H7BYZ3 331 aa16.58■□□□□ 0.24
RAB40C-209ENST00000565511 H2AFB2P0C5Z0 115 aa16.58■□□□□ 0.24
RAB40C-209ENST00000565511 C1orf134Q5TEV5 83 aa16.58■□□□□ 0.24
RAB40C-209ENST00000565511 LINC00612Q8N6U2 182 aa16.58■□□□□ 0.24
RAB40C-209ENST00000565511 LYRM2Q9NU23 88 aaPredicted RBP16.58■□□□□ 0.24
RAB40C-209ENST00000565511 PXMP4Q9Y6I8 212 aa16.58■□□□□ 0.24
RAB40C-209ENST00000565511 ABCA13Q86UQ4 5058 aa16.58■□□□□ 0.24
RAB40C-209ENST00000565511 TMEM252Q8N6L7 170 aa16.57■□□□□ 0.24
RAB40C-209ENST00000565511 OR10J6PQ8NGY7 276 aa16.57■□□□□ 0.24
RAB40C-209ENST00000565511 ATG101Q9BSB4 218 aa16.57■□□□□ 0.24
RAB40C-209ENST00000565511 SLC39A9Q9NUM3 307 aa16.57■□□□□ 0.24
RAB40C-209ENST00000565511 LINC00588Q9Y4M8 146 aa16.57■□□□□ 0.24
RAB40C-209ENST00000565511 LRP1BQ9NZR2 4599 aa16.56■□□□□ 0.24
RAB40C-209ENST00000565511 NPIPB6E9PJ23 425 aa16.56■□□□□ 0.24
RAB40C-209ENST00000565511 MED14OSP0DP75 135 aa16.56■□□□□ 0.24
RAB40C-209ENST00000565511 SULT1A1P50225 295 aa16.56■□□□□ 0.24
RAB40C-209ENST00000565511 BAXQ07812 192 aa16.56■□□□□ 0.24
RAB40C-209ENST00000565511 GCSAMLQ5JQS6 135 aa16.56■□□□□ 0.24
RAB40C-209ENST00000565511 ZNF493Q6ZR52 646 aa16.56■□□□□ 0.24
RAB40C-209ENST00000565511 M0R3E3 92 aa16.55■□□□□ 0.24
RAB40C-209ENST00000565511 RPL29P47914 159 aaKnown RBP16.55■□□□□ 0.24
RAB40C-209ENST00000565511 FAM3BP58499 235 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-209ENST00000565511 Q6ZRG5 221 aa16.55■□□□□ 0.24
RAB40C-209ENST00000565511 C20orf144Q9BQM9 153 aa16.55■□□□□ 0.24
RAB40C-209ENST00000565511 CCDC32Q9BV29 185 aa16.55■□□□□ 0.24
RAB40C-209ENST00000565511 HSPG2P98160 4391 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 TRAV12-3A0A0B4J271 114 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 NBDYA0A0U1RRE5 68 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 NDUFB4O95168 129 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 HOXA5P20719 270 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 TNP2Q05952 138 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 ERCC8Q13216 396 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 RAB31Q13636 194 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 OR1L4Q8NGR5 311 aa16.54■□□□□ 0.24
RAB40C-209ENST00000565511 PYYP10082 97 aa16.53■□□□□ 0.24
RAB40C-209ENST00000565511 FGF7P21781 194 aa16.53■□□□□ 0.24
RAB40C-209ENST00000565511 TRBV19A0A075B6N1 114 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 GAGE12BA1L429 117 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 GAGE7O76087 117 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 GAGE12FP0CL80 117 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 GAGE12GP0CL81 117 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 GAGE12IP0CL82 117 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 PVALBP20472 110 aaPredicted RBP16.52■□□□□ 0.24
RAB40C-209ENST00000565511 ODF3Q96PU9 254 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 PFDN5Q99471 154 aa16.52■□□□□ 0.24
RAB40C-209ENST00000565511 FAM240BA0A1B0GVZ2 78 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 SIX6O95475 246 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 S100A11P31949 105 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 LEPP41159 167 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 GUK1Q16774 197 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 SOHLH1Q5JUK2 328 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 CHAC2Q8WUX2 184 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 GPN1Q9HCN4 374 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-209ENST00000565511 NDUFA13Q9P0J0 144 aa16.51■□□□□ 0.23
RAB40C-209ENST00000565511 TRAV26-1A0A087WT03 109 aa16.5■□□□□ 0.23
RAB40C-209ENST00000565511 A0A0J9YY99 117 aa16.5■□□□□ 0.23
RAB40C-209ENST00000565511 ZNF253O75346 499 aa16.5■□□□□ 0.23
RAB40C-209ENST00000565511 OR5I1Q13606 314 aa16.5■□□□□ 0.23
RAB40C-209ENST00000565511 STX12Q86Y82 276 aa16.5■□□□□ 0.23
RAB40C-209ENST00000565511 KRTAP1-5Q9BYS1 174 aa16.5■□□□□ 0.23
RAB40C-209ENST00000565511 TMEM14CQ9P0S9 112 aa16.5■□□□□ 0.23
RAB40C-209ENST00000565511 NHLH2Q02577 135 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 Q6ZTI0 123 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 SSX7Q7RTT5 188 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 EXOC3-AS1Q8N2X6 119 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 THAP6Q8TBB0 222 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 FAM19A4Q96LR4 140 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 SLC25A2Q9BXI2 301 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 NPCDR1Q9BY65 106 aa16.49■□□□□ 0.23
RAB40C-209ENST00000565511 CCL18P55774 89 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 HBG1P69891 147 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 HBG2P69892 147 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 CD300CQ08708 224 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 BTN1A1Q13410 526 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 ASAH1Q13510 395 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 CCDC28AQ8IWP9 274 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 MRPL53Q96EL3 112 aaKnown RBP16.48■□□□□ 0.23
RAB40C-209ENST00000565511 FAM167A-AS1Q96KT0 104 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 TMPRSS5Q9H3S3 457 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 OR5AC2Q9NZP5 309 aa16.48■□□□□ 0.23
RAB40C-209ENST00000565511 H0YIZ8 118 aa16.47■□□□□ 0.23
RAB40C-209ENST00000565511 HIST1H1EP10412 219 aaKnown RBP16.47■□□□□ 0.23
RAB40C-209ENST00000565511 PRR9Q5T870 116 aa16.47■□□□□ 0.23
RAB40C-209ENST00000565511 Q6ZQT7 251 aa16.47■□□□□ 0.23
RAB40C-209ENST00000565511 C6orf223Q8N319 242 aa16.47■□□□□ 0.23
RAB40C-209ENST00000565511 C11orf72Q8NBR9 251 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms