RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 GZMBP10144 247 aa5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 RPL7P18124 248 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 PSG9Q00887 426 aa5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 FAM120AOSQ5T036 256 aa5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 NUP35Q8NFH5 326 aa5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 MEGF9Q9H1U4 602 aa5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 NPIPB6E9PJ23 425 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 ZNF253O75346 499 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 P01737 135 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 TPPP2P59282 170 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 ANXA2RQ3ZCQ2 193 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 UNQ5815/PRO19632Q6UWF5 114 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 Q6ZWC4 215 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 TMEM256Q8N2U0 113 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 RPP21Q9H633 154 aaKnown RBP5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 AAMDCQ9H7C9 122 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 HIF1ANQ9NWT6 349 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 RABAC1Q9UI14 185 aa5.65□□□□□ -1.51
HERPUD1-209ENST00000564678 IGHV1-69DA0A0B4J2H0 117 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 HIGD1CA8MV81 97 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 BMPR1BO00238 502 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 IGLV2-11P01706 119 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 IGHV1-69P01742 117 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 APCSP02743 223 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 CRIP2P52943 208 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 FOXA3P55318 350 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 TCL1AP56279 114 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 DSCR9P59020 149 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 IQCJQ1A5X6 159 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 MRPL54Q6P161 138 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 Q86TA4 180 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 EXOC3-AS1Q8N2X6 119 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 C5orf56Q8N8D9 126 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 ZNF502Q8TBZ5 544 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 MRPL53Q96EL3 112 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 ZNF479Q96JC4 524 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 HSPB9Q9BQS6 159 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 TP53TG3Q9ULZ0 132 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 RPH3ALQ9UNE2 315 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 TACC2O95359 2948 aa5.64□□□□□ -1.51
HERPUD1-209ENST00000564678 TRBV7-1A0A0A6YYK4 115 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 TRAV25A0A0B4J276 109 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 GRIFINA4D1Z8 144 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 OR2T8A6NH00 312 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 LINC00587B1AMM8 73 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 DIRC3C9JPN6 131 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 H3BTX0 84 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 ATP6V0E1O15342 81 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 SPINK4O60575 86 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 CA1P00915 261 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 FRMD6-AS1P0C7T7 363 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 CSN1S1P47710 185 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 RAB4BP61018 213 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 PKIAP61925 76 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 PSG3Q16557 428 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 GOLT1AQ6ZVE7 132 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 BAGE3Q86Y29 109 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 KRTAP1-3Q8IUG1 177 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 MOB4Q9Y3A3 225 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 PKD1L2Q7Z442 2459 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 IGHV4-61A0A0C4DH41 118 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 A0A1B0GXF2 115 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 TSTD3H0UI37 97 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 NUPR1O60356 82 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 PAX1P15863 534 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 ATP5J2P56134 94 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 HERV-K104P63124 156 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 SLC35B1P78383 322 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 C15orf32Q32M92 178 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 LINC00322Q6ZN03 302 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 SGK494Q96LW2 274 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 C17orf77Q96MU5 243 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 PEF1Q9UBV8 284 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 PSG8Q9UQ74 426 aa5.63□□□□□ -1.51
HERPUD1-209ENST00000564678 AKAP6Q13023 2319 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 A8MWP6 167 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 SERF1AO75920 110 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 BRI3O95415 125 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 RHOGP84095 191 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 CFHR3Q02985 330 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 ECSCRQ19T08 205 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 COX8CQ7Z4L0 72 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 PRNTQ86SH4 94 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 EEF1AKMT3Q96AZ1 226 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 RNF183Q96D59 192 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 GNB4Q9HAV0 340 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 S4R3C0 116 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 TRAV8-1A0A0A6YYK1 113 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 SRIP30626 198 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 LINC00310P59036 64 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 HBBP68871 147 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 SAPCD1Q5SSQ6 148 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 C1orf194Q5T5A4 169 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 FAM162BQ5T6X4 162 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 PIFOQ8TCI5 191 aa5.62□□□□□ -1.51
HERPUD1-209ENST00000564678 A0A1B0GUS0 222 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 FAM223BA6NKX1 122 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 M0QZK8 103 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 GPX1P07203 203 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms