RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 FAM240BA0A1B0GVZ2 78 aa10.56□□□□□ -0.72
SPG7-210ENST00000564409 F5H768 121 aa10.56□□□□□ -0.72
SPG7-210ENST00000564409 MPDU1O75352 247 aa10.56□□□□□ -0.72
SPG7-210ENST00000564409 PRM2P04554 102 aa10.56□□□□□ -0.72
SPG7-210ENST00000564409 IL15RAQ13261 267 aa10.56□□□□□ -0.72
SPG7-210ENST00000564409 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
SPG7-210ENST00000564409 RNASE8Q8TDE3 154 aaKnown RBP10.56□□□□□ -0.72
SPG7-210ENST00000564409 SEC22CQ9BRL7 303 aa10.56□□□□□ -0.72
SPG7-210ENST00000564409 IGLV2-18A0A075B6J9 118 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 FAM24AA6NFZ4 105 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 H3BQ15 152 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 HTN1P15515 57 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 LEPP41159 167 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 C1orf134Q5TEV5 83 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 MIC13Q5XKP0 118 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 S100ZQ8WXG8 99 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 MRPL53Q96EL3 112 aaKnown RBP10.55□□□□□ -0.72
SPG7-210ENST00000564409 SLC39A9Q9NUM3 307 aa10.55□□□□□ -0.72
SPG7-210ENST00000564409 SLC17A3O00476 420 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 CCL18P55774 89 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 S100A10P60903 97 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 BAXQ07812 192 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 PDE6HQ13956 83 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 MORN5Q5VZ52 161 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 TMEM252Q8N6L7 170 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 TMEM14CQ9P0S9 112 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 PRELID1Q9Y255 219 aa10.54□□□□□ -0.72
SPG7-210ENST00000564409 NPIPB6E9PJ23 425 aa10.53□□□□□ -0.72
SPG7-210ENST00000564409 RAB32Q13637 225 aa10.53□□□□□ -0.72
SPG7-210ENST00000564409 FCN2Q15485 313 aa10.53□□□□□ -0.72
SPG7-210ENST00000564409 GFI1BQ5VTD9 330 aa10.53□□□□□ -0.72
SPG7-210ENST00000564409 LINC00612Q8N6U2 182 aa10.53□□□□□ -0.72
SPG7-210ENST00000564409 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
SPG7-210ENST00000564409 PYGO2Q9BRQ0 406 aa10.53□□□□□ -0.72
SPG7-210ENST00000564409 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
SPG7-210ENST00000564409 NOP10Q9NPE3 64 aaKnown RBP10.53□□□□□ -0.72
SPG7-210ENST00000564409 UBE2L5PA0A1B0GUS4 154 aa10.52□□□□□ -0.73
SPG7-210ENST00000564409 IGSF23A1L1A6 192 aa10.52□□□□□ -0.73
SPG7-210ENST00000564409 PRAC2D3DTV9 90 aa10.52□□□□□ -0.73
SPG7-210ENST00000564409 NUDT3O95989 172 aa10.52□□□□□ -0.73
SPG7-210ENST00000564409 SNRPCP09234 159 aaKnown RBP10.52□□□□□ -0.73
SPG7-210ENST00000564409 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.73
SPG7-210ENST00000564409 ASAH1Q13510 395 aa10.52□□□□□ -0.73
SPG7-210ENST00000564409 ZNF586Q9NXT0 402 aa10.52□□□□□ -0.73
SPG7-210ENST00000564409 MUC4Q99102 2169 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 TRAV5A0A0B4J249 113 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 SNURFLB1AK76 121 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 H3BTX0 84 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 RLN2P04090 185 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 SLC25A5P05141 298 aaKnown RBP10.51□□□□□ -0.73
SPG7-210ENST00000564409 CT45A10P0DMU9 189 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 FGF7P21781 194 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 SLC25A31Q9H0C2 315 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 FAT2Q9NYQ8 4349 aa10.51□□□□□ -0.73
SPG7-210ENST00000564409 H3BNG1 76 aa10.5□□□□□ -0.73
SPG7-210ENST00000564409 CYCSP99999 105 aaKnown RBP10.5□□□□□ -0.73
SPG7-210ENST00000564409 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
SPG7-210ENST00000564409 CLINT1Q14677 625 aa10.5□□□□□ -0.73
SPG7-210ENST00000564409 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
SPG7-210ENST00000564409 KCNIP2Q9NS61 270 aa10.5□□□□□ -0.73
SPG7-210ENST00000564409 TIMM9Q9Y5J7 89 aa10.5□□□□□ -0.73
SPG7-210ENST00000564409 NBDYA0A0U1RRE5 68 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 NMBP08949 121 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 M6PRP20645 277 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 KIR3DS1Q14943 382 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 ZNF680Q8NEM1 530 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 ENKURQ8TC29 256 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 GNPNAT1Q96EK6 184 aaPredicted RBP10.49□□□□□ -0.73
SPG7-210ENST00000564409 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 NPCDR1Q9BY65 106 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 NMES1Q9C002 83 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 AAMDCQ9H7C9 122 aa10.49□□□□□ -0.73
SPG7-210ENST00000564409 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
SPG7-210ENST00000564409 TRAV12-3A0A0B4J271 114 aa10.48□□□□□ -0.73
SPG7-210ENST00000564409 E5RGE8 158 aa10.48□□□□□ -0.73
SPG7-210ENST00000564409 PRAF2O60831 178 aa10.48□□□□□ -0.73
SPG7-210ENST00000564409 PRB4P10163 310 aaPredicted RBP10.48□□□□□ -0.73
SPG7-210ENST00000564409 RXFP4Q8TDU9 374 aa10.48□□□□□ -0.73
SPG7-210ENST00000564409 PARD6GQ9BYG4 376 aaPredicted RBP10.48□□□□□ -0.73
SPG7-210ENST00000564409 DNAH2Q9P225 4427 aa10.48□□□□□ -0.73
SPG7-210ENST00000564409 C7orf71A4D174 169 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 KLLNB2CW77 178 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 NDUFB4O95168 129 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 OR5I1Q13606 314 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 C9orf47Q6ZRZ4 202 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 OR5C1Q8NGR4 320 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 FAM19A4Q96LR4 140 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 C18orf15Q96N68 181 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 LINC00588Q9Y4M8 146 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 PCLOQ9Y6V0 5065 aa10.47□□□□□ -0.73
SPG7-210ENST00000564409 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
SPG7-210ENST00000564409 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.73
SPG7-210ENST00000564409 CRISP2P16562 243 aa10.46□□□□□ -0.73
SPG7-210ENST00000564409 NHLH2Q02577 135 aa10.46□□□□□ -0.73
SPG7-210ENST00000564409 ANXA2RQ3ZCQ2 193 aa10.46□□□□□ -0.73
SPG7-210ENST00000564409 TTC32Q5I0X7 151 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms