RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 DEFB131BA0A096LNP1 70 aa22■■□□□ 1.11
CMTM4-204ENST00000563952 FAM222AQ5U5X8 452 aa22■■□□□ 1.11
CMTM4-204ENST00000563952 MIR17HGQ75NE6 70 aa22■■□□□ 1.11
CMTM4-204ENST00000563952 SLC25A2Q9BXI2 301 aa22■■□□□ 1.11
CMTM4-204ENST00000563952 YTHDF2Q9Y5A9 579 aaKnown RBP22■■□□□ 1.11
CMTM4-204ENST00000563952 TRBV19A0A075B6N1 114 aa21.99■■□□□ 1.11
CMTM4-204ENST00000563952 ZNF705GA8MUZ8 300 aaPredicted RBP21.99■■□□□ 1.11
CMTM4-204ENST00000563952 BLNKQ8WV28 456 aa21.99■■□□□ 1.11
CMTM4-204ENST00000563952 MED28Q9H204 178 aa21.99■■□□□ 1.11
CMTM4-204ENST00000563952 DKK2Q9UBU2 259 aa21.99■■□□□ 1.11
CMTM4-204ENST00000563952 TIMM9Q9Y5J7 89 aa21.99■■□□□ 1.11
CMTM4-204ENST00000563952 ZNF253O75346 499 aa21.98■■□□□ 1.11
CMTM4-204ENST00000563952 PRM2P04554 102 aa21.98■■□□□ 1.11
CMTM4-204ENST00000563952 HIST1H1EP10412 219 aaKnown RBP21.98■■□□□ 1.11
CMTM4-204ENST00000563952 TCTAP57738 103 aa21.98■■□□□ 1.11
CMTM4-204ENST00000563952 APLNQ9ULZ1 77 aa21.98■■□□□ 1.11
CMTM4-204ENST00000563952 IFNA5P01569 189 aa21.97■■□□□ 1.11
CMTM4-204ENST00000563952 CDKN1BP46527 198 aa21.97■■□□□ 1.11
CMTM4-204ENST00000563952 FCN2Q15485 313 aa21.97■■□□□ 1.11
CMTM4-204ENST00000563952 LGALS9CQ6DKI2 356 aa21.97■■□□□ 1.11
CMTM4-204ENST00000563952 RPP25LQ8N5L8 163 aaKnown RBP21.97■■□□□ 1.11
CMTM4-204ENST00000563952 SCGB1C1Q8TD33 95 aa21.97■■□□□ 1.11
CMTM4-204ENST00000563952 EPPK1P58107 5090 aaKnown RBP21.96■■□□□ 1.11
CMTM4-204ENST00000563952 IGHV4-4A0A075B6R2 117 aa21.96■■□□□ 1.11
CMTM4-204ENST00000563952 TEX48A0A1B0GUV7 120 aa21.96■■□□□ 1.11
CMTM4-204ENST00000563952 LINC01587Q99440 93 aa21.96■■□□□ 1.11
CMTM4-204ENST00000563952 PARD6GQ9BYG4 376 aaPredicted RBP21.96■■□□□ 1.11
CMTM4-204ENST00000563952 PLA2G2EQ9NZK7 142 aa21.96■■□□□ 1.11
CMTM4-204ENST00000563952 NDUFB4O95168 129 aa21.95■■□□□ 1.1
CMTM4-204ENST00000563952 FAM167A-AS1Q96KT0 104 aa21.95■■□□□ 1.1
CMTM4-204ENST00000563952 NIPSNAP3BQ9BS92 247 aa21.95■■□□□ 1.1
CMTM4-204ENST00000563952 MRPL32Q9BYC8 188 aaKnown RBP21.95■■□□□ 1.1
CMTM4-204ENST00000563952 FFAR4Q5NUL3 377 aa21.94■■□□□ 1.1
CMTM4-204ENST00000563952 M0R3E3 92 aa21.93■■□□□ 1.1
CMTM4-204ENST00000563952 PDE6HQ13956 83 aa21.93■■□□□ 1.1
CMTM4-204ENST00000563952 TMEM256Q8N2U0 113 aa21.93■■□□□ 1.1
CMTM4-204ENST00000563952 OR51M1Q9H341 326 aa21.93■■□□□ 1.1
CMTM4-204ENST00000563952 WFDC1Q9HC57 220 aa21.93■■□□□ 1.1
CMTM4-204ENST00000563952 FUT9Q9Y231 359 aa21.93■■□□□ 1.1
CMTM4-204ENST00000563952 HTN1P15515 57 aa21.92■■□□□ 1.1
CMTM4-204ENST00000563952 TSPOP30536 169 aa21.92■■□□□ 1.1
CMTM4-204ENST00000563952 EXOC3-AS1Q8N2X6 119 aa21.92■■□□□ 1.1
CMTM4-204ENST00000563952 MRPL53Q96EL3 112 aaKnown RBP21.92■■□□□ 1.1
CMTM4-204ENST00000563952 NPIPB6E9PJ23 425 aa21.91■■□□□ 1.1
CMTM4-204ENST00000563952 OR10J4P0C629 311 aa21.91■■□□□ 1.1
CMTM4-204ENST00000563952 AZU1P20160 251 aa21.91■■□□□ 1.1
CMTM4-204ENST00000563952 KIR3DS1Q14943 382 aa21.91■■□□□ 1.1
CMTM4-204ENST00000563952 PAXXQ9BUH6 204 aa21.91■■□□□ 1.1
CMTM4-204ENST00000563952 AAMDCQ9H7C9 122 aa21.91■■□□□ 1.1
CMTM4-204ENST00000563952 PRELID1Q9Y255 219 aa21.91■■□□□ 1.1
CMTM4-204ENST00000563952 J3KRW8 73 aa21.9■■□□□ 1.1
CMTM4-204ENST00000563952 CT45A10P0DMU9 189 aa21.9■■□□□ 1.1
CMTM4-204ENST00000563952 NBEAP1P0C6P0 100 aa21.89■■□□□ 1.09
CMTM4-204ENST00000563952 HTN3P15516 51 aa21.89■■□□□ 1.09
CMTM4-204ENST00000563952 TAS2R60P59551 318 aa21.89■■□□□ 1.09
CMTM4-204ENST00000563952 DAD1P61803 113 aa21.89■■□□□ 1.09
CMTM4-204ENST00000563952 OR7C2O60412 319 aa21.88■■□□□ 1.09
CMTM4-204ENST00000563952 LEPP41159 167 aa21.88■■□□□ 1.09
CMTM4-204ENST00000563952 ERCC8Q13216 396 aa21.88■■□□□ 1.09
CMTM4-204ENST00000563952 ICAM4Q14773 271 aa21.88■■□□□ 1.09
CMTM4-204ENST00000563952 GFI1BQ5VTD9 330 aa21.88■■□□□ 1.09
CMTM4-204ENST00000563952 RNF141Q8WVD5 230 aa21.88■■□□□ 1.09
CMTM4-204ENST00000563952 FXYD5Q96DB9 178 aa21.88■■□□□ 1.09
CMTM4-204ENST00000563952 OXA1LQ15070 435 aa21.86■■□□□ 1.09
CMTM4-204ENST00000563952 FAM122CQ6P4D5 195 aa21.86■■□□□ 1.09
CMTM4-204ENST00000563952 ODF3Q96PU9 254 aa21.86■■□□□ 1.09
CMTM4-204ENST00000563952 NDUFAF3Q9BU61 184 aa21.86■■□□□ 1.09
CMTM4-204ENST00000563952 H7BYZ3 331 aa21.85■■□□□ 1.09
CMTM4-204ENST00000563952 RGS21Q2M5E4 152 aa21.85■■□□□ 1.09
CMTM4-204ENST00000563952 C20orf144Q9BQM9 153 aa21.85■■□□□ 1.09
CMTM4-204ENST00000563952 BIRC6Q9NR09 4857 aa21.84■■□□□ 1.09
CMTM4-204ENST00000563952 PLAC8L1A1L4L8 177 aa21.84■■□□□ 1.09
CMTM4-204ENST00000563952 LYRM9A8MSI8 78 aa21.84■■□□□ 1.09
CMTM4-204ENST00000563952 PHYHIPLQ96FC7 376 aa21.84■■□□□ 1.09
CMTM4-204ENST00000563952 C16orf74Q96GX8 76 aa21.84■■□□□ 1.09
CMTM4-204ENST00000563952 GIPP09681 153 aaPredicted RBP21.83■■□□□ 1.09
CMTM4-204ENST00000563952 DEFB130BP0DP73 79 aa21.83■■□□□ 1.09
CMTM4-204ENST00000563952 DEFB130AP0DP74 79 aa21.83■■□□□ 1.09
CMTM4-204ENST00000563952 UBE2L3P68036 154 aaKnown RBP21.83■■□□□ 1.09
CMTM4-204ENST00000563952 KHDC3LQ587J8 217 aa21.83■■□□□ 1.09
CMTM4-204ENST00000563952 Q5BKY6 102 aa21.83■■□□□ 1.09
CMTM4-204ENST00000563952 ZNF503Q96F45 646 aa21.83■■□□□ 1.09
CMTM4-204ENST00000563952 IGKV2-40A0A087WW87 121 aaPredicted RBP21.82■■□□□ 1.08
CMTM4-204ENST00000563952 TRAV12-3A0A0B4J271 114 aa21.82■■□□□ 1.08
CMTM4-204ENST00000563952 EIF3GO75821 320 aaKnown RBP eCLIP21.82■■□□□ 1.08
CMTM4-204ENST00000563952 IGKV2D-40P01614 121 aaPredicted RBP21.82■■□□□ 1.08
CMTM4-204ENST00000563952 TAS2R45P59539 299 aa21.82■■□□□ 1.08
CMTM4-204ENST00000563952 AGPAT4-IT1Q9H0P7 198 aa21.82■■□□□ 1.08
CMTM4-204ENST00000563952 ACOT6Q3I5F7 207 aaPredicted RBP21.81■■□□□ 1.08
CMTM4-204ENST00000563952 LINC00477Q96M19 166 aa21.81■■□□□ 1.08
CMTM4-204ENST00000563952 AQP10Q96PS8 301 aa21.81■■□□□ 1.08
CMTM4-204ENST00000563952 RANP62826 216 aaKnown RBP21.8■■□□□ 1.08
CMTM4-204ENST00000563952 TMEM263Q8WUH6 116 aaKnown RBP21.8■■□□□ 1.08
CMTM4-204ENST00000563952 ASB13Q8WXK3 278 aa21.8■■□□□ 1.08
CMTM4-204ENST00000563952 M6PRP20645 277 aa21.79■■□□□ 1.08
CMTM4-204ENST00000563952 RAB2AP61019 212 aa21.79■■□□□ 1.08
CMTM4-204ENST00000563952 ZNF266Q14584 549 aa21.79■■□□□ 1.08
CMTM4-204ENST00000563952 ZNF493Q6ZR52 646 aa21.79■■□□□ 1.08
CMTM4-204ENST00000563952 CCDC28AQ8IWP9 274 aa21.79■■□□□ 1.08
CMTM4-204ENST00000563952 RNASE8Q8TDE3 154 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms