RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 Q8WTZ3 238 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 RNF125Q96EQ8 232 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 ARL6Q9H0F7 186 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 TRAV8-2A0A0B4J237 113 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 A0A1W2PPQ1 181 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 RNF222A6NCQ9 220 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 K7EPK0 472 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 CFDP00746 253 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-204ENST00000563739 HOXA5P20719 270 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 RAB11AP62491 216 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 SPINK13Q1W4C9 94 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 LRRC37A5PQ49AS3 106 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 SPANXN5Q5MJ07 72 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 ETFRF1Q6IPR1 90 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 ACOT7LQ6ZUV0 252 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 SMIM8Q96KF7 97 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 DOK5Q9P104 306 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 MBD2Q9UBB5 411 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 MRPS16Q9Y3D3 137 aaKnown RBP7.1□□□□□ -1.27
SF3B3-204ENST00000563739 STRAPQ9Y3F4 350 aaKnown RBP7.1□□□□□ -1.27
SF3B3-204ENST00000563739 TNFRSF18Q9Y5U5 241 aa7.1□□□□□ -1.27
SF3B3-204ENST00000563739 PRSS46E5RG02 174 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 H0YIZ8 118 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 ISLRO14498 428 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 SCGB2A1O75556 95 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 ATP5G1P05496 136 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 GPX4P36969 197 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-204ENST00000563739 ATP5G3P48201 142 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 TAS2R30P59541 319 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 S100A10P60903 97 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 ZNF90Q03938 601 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 RAB32Q13637 225 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 TTC32Q5I0X7 151 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 SPATA31B1PQ5VZV4 182 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 OR8G2PQ6IF36 304 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 TMEM14EPQ6UXP3 125 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 INO80EQ8NBZ0 244 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-204ENST00000563739 ACY3Q96HD9 319 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 SLC35E1Q96K37 410 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 PSENENQ9NZ42 101 aa7.09□□□□□ -1.27
SF3B3-204ENST00000563739 LSM5Q9Y4Y9 91 aaKnown RBP7.09□□□□□ -1.27
SF3B3-204ENST00000563739 TRAV12-2A0A075B6T6 113 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 IGKV1OR2-108A0A075B7D4 117 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 CBY3A6NI87 242 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 BCL2L11O43521 198 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 PET100P0DJ07 73 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 RD3LP0DJH9 198 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 CNN1P51911 297 aaKnown RBP7.08□□□□□ -1.28
SF3B3-204ENST00000563739 VAMP2P63027 116 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 IGFL4Q6B9Z1 124 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 FRZBQ92765 325 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 SLC25A32Q9H2D1 315 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 C11orf1Q9H5F2 150 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 OR5AC2Q9NZP5 309 aa7.08□□□□□ -1.28
SF3B3-204ENST00000563739 TRAV26-1A0A087WT03 109 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 KANTRA0A1W2PQU2 76 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 LINC00862A6NCI5 91 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 PMS2P5A8MQ11 134 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 RLN2P04090 185 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 METTL15P1P0C7V9 234 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 PRB4P10163 310 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-204ENST00000563739 PVALBP20472 110 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-204ENST00000563739 S100A1P23297 94 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 NUP62P37198 522 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-204ENST00000563739 GAMTQ14353 236 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 CLLU1Q5K131 121 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 RNASE8Q8TDE3 154 aaKnown RBP7.07□□□□□ -1.28
SF3B3-204ENST00000563739 RXFP4Q8TDU9 374 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 ARPC5LQ9BPX5 153 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 PBDC1Q9BVG4 233 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
SF3B3-204ENST00000563739 A0A0J9YY99 117 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 INSP01308 110 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 CAV2P51636 162 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 RAB14P61106 215 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 KIR3DS1Q14943 382 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 C1orf194Q5T5A4 169 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 CDPF1Q6NVV7 123 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 RNF182Q8N6D2 247 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 THAP8Q8NA92 274 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 ZNF503Q96F45 646 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 VSIG2Q96IQ7 327 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 FAM210AQ96ND0 272 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 SLC25A39Q9BZJ4 359 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-204ENST00000563739 LYRM2Q9NU23 88 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-204ENST00000563739 LRP2P98164 4655 aa7.06□□□□□ -1.28
SF3B3-204ENST00000563739 A0A087WTM6 91 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 A0A096LPF7 62 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 ZFP92A6NM28 416 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 ID1P41134 155 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 AKR1C1Q04828 323 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 ARL16Q0P5N6 197 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 CLINT1Q14677 625 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 ICAM4Q14773 271 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 EBLN2Q6P2I7 272 aa7.05□□□□□ -1.28
SF3B3-204ENST00000563739 TMEM182Q6ZP80 229 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-204ENST00000563739 OR10P1Q8NGE3 313 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms