RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 HERV-K104P63124 156 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 LOXL1Q08397 574 aaPredicted RBP9.38□□□□□ -0.91
ABCA3-203ENST00000563623 PRSS57Q6UWY2 283 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 DEFB125Q8N687 156 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 GFRA4Q9GZZ7 299 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 RALYQ9UKM9 306 aaKnown RBP9.38□□□□□ -0.91
ABCA3-203ENST00000563623 NCBP2LA6PVI3 153 aaKnown RBP9.37□□□□□ -0.91
ABCA3-203ENST00000563623 ORM1P02763 201 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
ABCA3-203ENST00000563623 FAM57AQ8TBR7 257 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 MS4A6AQ9H2W1 248 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
ABCA3-203ENST00000563623 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
ABCA3-203ENST00000563623 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 ZNF747Q9BV97 191 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 JKAMPQ9P055 326 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 INS-IGF2F8WCM5 200 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 CRYGCP07315 174 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 NUP37Q8NFH4 326 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 Q8TAT8 98 aa9.37□□□□□ -0.91
ABCA3-203ENST00000563623 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
ABCA3-203ENST00000563623 NCOR2Q9Y618 2525 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 CD5LO43866 347 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 FOXE3Q13461 319 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 TRBV19A0A075B6N1 114 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 TIMM23O14925 209 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 IGKV1-17P01599 117 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 DCHS1Q96JQ0 3298 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 PPIFP30405 207 aaKnown RBP9.36□□□□□ -0.91
ABCA3-203ENST00000563623 BOD1L2Q8IYS8 172 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 LINC00311Q8N616 119 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 ZNF414Q96IQ9 312 aa9.36□□□□□ -0.91
ABCA3-203ENST00000563623 ANKRD11Q6UB99 2663 aaPredicted RBP9.35□□□□□ -0.91
ABCA3-203ENST00000563623 NPIPB5A8MRT5 1133 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 PRSS1P07477 247 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 COX8AP10176 69 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 PSG3Q16557 428 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 TEX48A0A1B0GUV7 120 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 GAGE12HA6NDE8 117 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 A6NDN8 102 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 LY6HO94772 140 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 BCL6BQ8N143 479 aaPredicted RBP9.35□□□□□ -0.91
ABCA3-203ENST00000563623 SIGLEC8Q9NYZ4 499 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 CFAP47Q6ZTR5 3102 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
ABCA3-203ENST00000563623 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
ABCA3-203ENST00000563623 A1L4Q6 167 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 BUB1B-PAK6H3BSN5 160 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 CRXO43186 299 aaPredicted RBP9.35□□□□□ -0.91
ABCA3-203ENST00000563623 LINC01545Q5VT33 79 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 Q6ZS92 163 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 RABAC1Q9UI14 185 aa9.35□□□□□ -0.91
ABCA3-203ENST00000563623 IGHV3OR16-13A0A075B7E8 117 aa9.34□□□□□ -0.91
ABCA3-203ENST00000563623 IGHV3-74A0A0B4J1X5 117 aa9.34□□□□□ -0.91
ABCA3-203ENST00000563623 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
ABCA3-203ENST00000563623 TEX22C9J3V5 150 aa9.34□□□□□ -0.91
ABCA3-203ENST00000563623 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
ABCA3-203ENST00000563623 DMXL2Q8TDJ6 3036 aa9.34□□□□□ -0.91
ABCA3-203ENST00000563623 E7EQL1 145 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 SH2D1AO60880 128 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 THBDP07204 575 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 FABP2P12104 132 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 GCSHP23434 173 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 EVI2AP22794 236 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 MRGPRG-AS1Q2M3A8 158 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 C3orf36Q3SXR2 165 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 CHD8Q9HCK8 2581 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 KLRD1Q13241 179 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 SMIM20Q8N5G0 67 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 LINC01560Q8TB33 94 aa9.33□□□□□ -0.92
ABCA3-203ENST00000563623 ZNF785A8K8V0 405 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 I3L2K1 104 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 FCER1GP30273 86 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 CRIP1P50238 77 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 SIGLEC15Q6ZMC9 328 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 ADGRG4Q8IZF6 3080 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 IGHV3-66A0A0C4DH42 116 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 CD3EP07766 207 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 ZNF491Q8N8L2 437 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 C1RLQ9NZP8 487 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 IGF2RP11717 2491 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 A0A0G2JLM5 398 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 HBDP02042 147 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 HLA-DMBP28068 263 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 KIR3DS1Q14943 382 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 MRPL51Q4U2R6 128 aaKnown RBP9.32□□□□□ -0.92
ABCA3-203ENST00000563623 TMEM14CQ9P0S9 112 aa9.32□□□□□ -0.92
ABCA3-203ENST00000563623 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 DLX6P56179 175 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 PCP2Q8IVA1 136 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 IGHV3-49A0A0A0MS15 119 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 K7EIM0 57 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 NPYP01303 97 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 MFAP4P55083 255 aa9.31□□□□□ -0.92
ABCA3-203ENST00000563623 CD300EQ496F6 205 aaPredicted RBP9.31□□□□□ -0.92
ABCA3-203ENST00000563623 FAM104BQ5XKR9 115 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms