RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 CNPY1Q3B7I2 92 aa14.57□□□□□ -0.08
CHD9-208ENST00000563410 C20orf85Q9H1P6 137 aa14.57□□□□□ -0.08
CHD9-208ENST00000563410 DNAJC4Q9NNZ3 241 aa14.57□□□□□ -0.08
CHD9-208ENST00000563410 LSM5Q9Y4Y9 91 aaKnown RBP14.57□□□□□ -0.08
CHD9-208ENST00000563410 PXMP4Q9Y6I8 212 aa14.57□□□□□ -0.08
CHD9-208ENST00000563410 TRAV26-1A0A087WT03 109 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 TRAV5A0A0B4J249 113 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 L7N2F9 121 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 CT45A10P0DMU9 189 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 HOXA5P20719 270 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 VAMP2P63027 116 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 OR5I1Q13606 314 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 MIC13Q5XKP0 118 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 NRARPQ7Z6K4 114 aa14.56□□□□□ -0.08
CHD9-208ENST00000563410 C16orf90A8MZG2 172 aa14.55□□□□□ -0.08
CHD9-208ENST00000563410 J3KRW8 73 aa14.55□□□□□ -0.08
CHD9-208ENST00000563410 CCDC28AQ8IWP9 274 aa14.55□□□□□ -0.08
CHD9-208ENST00000563410 GNPNAT1Q96EK6 184 aaPredicted RBP14.55□□□□□ -0.08
CHD9-208ENST00000563410 Q9H8V8 135 aa14.55□□□□□ -0.08
CHD9-208ENST00000563410 DNAH5Q8TE73 4624 aa14.55□□□□□ -0.08
CHD9-208ENST00000563410 APOBP04114 4563 aaKnown RBP14.54□□□□□ -0.08
CHD9-208ENST00000563410 GAGE12BA1L429 117 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 FAM24AA6NFZ4 105 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 NPIPB6E9PJ23 425 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 GAGE7O76087 117 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 CST7O76096 145 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 GAGE12FP0CL80 117 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 GAGE12GP0CL81 117 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 GAGE12IP0CL82 117 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 M6PRP20645 277 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 Q6ZRG5 221 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 RXFP4Q8TDU9 374 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 ZNF431Q8TF32 576 aaPredicted RBP14.54□□□□□ -0.08
CHD9-208ENST00000563410 ZNF503Q96F45 646 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 ODF3Q96PU9 254 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 KRTAP1-5Q9BYS1 174 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 ZNF586Q9NXT0 402 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 WDR83OSQ9Y284 106 aa14.54□□□□□ -0.08
CHD9-208ENST00000563410 TRAV12-3A0A0B4J271 114 aa14.53□□□□□ -0.08
CHD9-208ENST00000563410 A0A0J9YY99 117 aa14.53□□□□□ -0.08
CHD9-208ENST00000563410 BCAP31P51572 246 aa14.53□□□□□ -0.08
CHD9-208ENST00000563410 CAV2P51636 162 aa14.53□□□□□ -0.08
CHD9-208ENST00000563410 ZNF846Q147U1 533 aa14.53□□□□□ -0.08
CHD9-208ENST00000563410 GUK1Q16774 197 aa14.53□□□□□ -0.08
CHD9-208ENST00000563410 VWC2Q2TAL6 325 aa14.53□□□□□ -0.08
CHD9-208ENST00000563410 FAM25EA8MYX2 175 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 SNURFLB1AK76 121 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 LYRM1O43325 122 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 CDK2AP2O75956 126 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 RLN2P04090 185 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 TCRBP04435 133 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 LEPP41159 167 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 RAB31Q13636 194 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 OR1L4Q8NGR5 311 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 SEC22CQ9BRL7 303 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 UQCC1Q9NVA1 299 aa14.52□□□□□ -0.09
CHD9-208ENST00000563410 TRAV6A0A075B6T7 132 aa14.51□□□□□ -0.09
CHD9-208ENST00000563410 RPL29P47914 159 aaKnown RBP14.51□□□□□ -0.09
CHD9-208ENST00000563410 ESRGQ1W209 222 aa14.51□□□□□ -0.09
CHD9-208ENST00000563410 PFDN5Q99471 154 aa14.51□□□□□ -0.09
CHD9-208ENST00000563410 PYGO2Q9BRQ0 406 aa14.51□□□□□ -0.09
CHD9-208ENST00000563410 UPK3BQ9BT76 320 aa14.51□□□□□ -0.09
CHD9-208ENST00000563410 SLC39A9Q9NUM3 307 aa14.51□□□□□ -0.09
CHD9-208ENST00000563410 C5orf51A6NDU8 294 aa14.5□□□□□ -0.09
CHD9-208ENST00000563410 ZNF253O75346 499 aa14.5□□□□□ -0.09
CHD9-208ENST00000563410 DAZ2Q13117 558 aaKnown RBP14.5□□□□□ -0.09
CHD9-208ENST00000563410 IL15RAQ13261 267 aa14.5□□□□□ -0.09
CHD9-208ENST00000563410 Q6ZTI0 123 aa14.5□□□□□ -0.09
CHD9-208ENST00000563410 C2orf50Q96LR7 162 aa14.5□□□□□ -0.09
CHD9-208ENST00000563410 Q9H3A6 140 aa14.5□□□□□ -0.09
CHD9-208ENST00000563410 TRBV19A0A075B6N1 114 aa14.49□□□□□ -0.09
CHD9-208ENST00000563410 IGSF23A1L1A6 192 aa14.49□□□□□ -0.09
CHD9-208ENST00000563410 H3BNG1 76 aa14.49□□□□□ -0.09
CHD9-208ENST00000563410 M0R3E3 92 aa14.49□□□□□ -0.09
CHD9-208ENST00000563410 ERCC8Q13216 396 aa14.49□□□□□ -0.09
CHD9-208ENST00000563410 C12orf45Q8N5I9 185 aaPredicted RBP14.49□□□□□ -0.09
CHD9-208ENST00000563410 MRPL53Q96EL3 112 aaKnown RBP14.49□□□□□ -0.09
CHD9-208ENST00000563410 TMPRSS5Q9H3S3 457 aa14.49□□□□□ -0.09
CHD9-208ENST00000563410 LYRM2Q9NU23 88 aaPredicted RBP14.49□□□□□ -0.09
CHD9-208ENST00000563410 UBE2L5PA0A1B0GUS4 154 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 NDUFB4O95168 129 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 SULT1A1P50225 295 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 BAXQ07812 192 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 TTC32Q5I0X7 151 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 C11orf72Q8NBR9 251 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 CHAC2Q8WUX2 184 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 FAM19A4Q96LR4 140 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 NUDT15Q9NV35 164 aa14.48□□□□□ -0.09
CHD9-208ENST00000563410 SLC25A5P05141 298 aaKnown RBP14.47□□□□□ -0.09
CHD9-208ENST00000563410 PVALBP20472 110 aaPredicted RBP14.47□□□□□ -0.09
CHD9-208ENST00000563410 S100A11P31949 105 aa14.47□□□□□ -0.09
CHD9-208ENST00000563410 RAB32Q13637 225 aa14.47□□□□□ -0.09
CHD9-208ENST00000563410 SPATA12Q7Z6I5 190 aa14.47□□□□□ -0.09
CHD9-208ENST00000563410 TMEM252Q8N6L7 170 aa14.47□□□□□ -0.09
CHD9-208ENST00000563410 TMEM14CQ9P0S9 112 aa14.47□□□□□ -0.09
CHD9-208ENST00000563410 MRPS16Q9Y3D3 137 aaKnown RBP14.47□□□□□ -0.09
CHD9-208ENST00000563410 C7orf71A4D174 169 aa14.46□□□□□ -0.09
CHD9-208ENST00000563410 KLLNB2CW77 178 aa14.46□□□□□ -0.09
CHD9-208ENST00000563410 ZNF324O75467 553 aaPredicted RBP14.46□□□□□ -0.09
CHD9-208ENST00000563410 S100A10P60903 97 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms