RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RPRMQ9NS64 109 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 CBLN4Q9NTU7 201 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 NDUFB11Q9NX14 153 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 HHLA3Q9XRX5 114 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 MPC1Q9Y5U8 109 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 REREQ9P2R6 1566 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 MAPKBP1O60336 1514 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 POLA1P09884 1462 aaPredicted RBP1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 CAMSAP2Q08AD1 1489 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 MBD5Q9P267 1494 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 FOCADQ5VW36 1801 aa1.5□□□□□ -2.17
SHCBP1-202ENST00000563219 TROQ12816 1431 aaPredicted RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 PRG4Q92954 1404 aaPredicted RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 MYH11P35749 1972 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAV27A0A087WT01 109 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TMSB15BA0A087X1C1 80 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAV13-1A0A0B4J241 112 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAV41A0A0B4J266 112 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 MUC21A0A0G2JKD1 596 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 MUC21A0A140T8X8 626 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TCRBV3S1A0A5B6 114 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 DPRXA6NFQ7 191 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 OR2T8A6NH00 312 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TMEM262E9PQX1 116 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 H3BMG7 143 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 CCDC179H3BU77 68 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 APOC4-APOC2K7ER74 178 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TAX1BP3O14907 124 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 NDUFB3O43676 98 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 EDF1O60869 148 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 APOC2P02655 101 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 MT-ND6P03923 174 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 CRYGSP22914 178 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 S100A4P26447 101 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 FKBP2P26885 142 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 PSMB8P28062 276 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 SRP14P37108 136 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TMBIM6P55061 237 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 FOXA3P55318 350 aaPredicted RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TMEM258P61165 79 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 BTG2P78543 158 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 DCDP81605 110 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 PLGLB1Q02325 96 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 ZNF90Q03938 601 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 RPL18Q07020 188 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 C1orf140Q5VVS0 124 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 Q5XG85 94 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 IZUMO2Q6UXV1 221 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 FOXI2Q6ZQN5 318 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 PLPP5Q8NEB5 264 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 OR10AC1Q8NH08 325 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 MRPL30Q8TCC3 161 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TOMM6Q96B49 74 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 TEX37Q96LM6 180 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 ADAT1Q9BUB4 502 aaKnown RBP1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 OTORQ9NRC9 128 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 FAM215AQ9Y5M1 114 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 PSME4Q14997 1843 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 KIF20BQ96Q89 1820 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 BCL9LQ86UU0 1499 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 ANKRD26Q9UPS8 1709 aa1.49□□□□□ -2.17
SHCBP1-202ENST00000563219 PLXND1Q9Y4D7 1925 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 MYO9BQ13459 2157 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 TRGV10A0A0A0MS01 117 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 IGHV1-58A0A0C4DH39 117 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 FAM236AA0A1B0GUQ0 79 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 FAM236BA0A1B0GV22 79 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 A0A1B0GW54 56 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 ODAMA1E959 279 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 ARRDC5A6NEK1 342 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 OR51F1A6NGY5 319 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 H3BQ15 152 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 H7C2G1 150 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 GEMIN2O14893 280 aaKnown RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 MRPS14O60783 128 aaKnown RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 PGLYRP1O75594 196 aaPredicted RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 NAPSAO96009 420 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 IGKV1-5P01602 117 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 TRACP01848 142 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 PYYP10082 97 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST1H2BOP23527 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 CD24P25063 80 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST1H2BBP33778 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 RPL22P35268 128 aaKnown RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST1H2BDP58876 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 LSM3P62310 102 aaKnown RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST1H2BCP62807 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 KLRD1Q13241 179 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST2H2BEQ16778 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 RRN3P1Q2M238 152 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 ZNF791Q3KP31 576 aaPredicted RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 Q56UQ5 140 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 C9orf153Q5TBE3 101 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 C22orf39Q6P5X5 142 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 ALKAL2Q6UX46 152 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 RPS19BP1Q86WX3 136 aaKnown RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 ATOH7Q8N100 152 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 OR4B1Q8NGF8 309 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms