RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 ZNF586Q9NXT0 402 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 PXMP4Q9Y6I8 212 aa11.09□□□□□ -0.63
SF3B3-203ENST00000562874 F5H768 121 aa11.08□□□□□ -0.64
SF3B3-203ENST00000562874 TAS2R60P59551 318 aa11.08□□□□□ -0.64
SF3B3-203ENST00000562874 ASAH1Q13510 395 aa11.08□□□□□ -0.64
SF3B3-203ENST00000562874 LRRC37A5PQ49AS3 106 aa11.08□□□□□ -0.64
SF3B3-203ENST00000562874 GCSAMLQ5JQS6 135 aa11.08□□□□□ -0.64
SF3B3-203ENST00000562874 OR10J6PQ8NGY7 276 aa11.08□□□□□ -0.64
SF3B3-203ENST00000562874 SAT2Q96F10 170 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-203ENST00000562874 PFDN5Q99471 154 aa11.08□□□□□ -0.64
SF3B3-203ENST00000562874 A0A1B0GVY2 172 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 PRSS29PA6NIE9 313 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 M0R3E3 92 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 PYYP10082 97 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 HBG1P69891 147 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 HBG2P69892 147 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 RNASE8Q8TDE3 154 aaKnown RBP11.07□□□□□ -0.64
SF3B3-203ENST00000562874 S100ZQ8WXG8 99 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 NOP10Q9NPE3 64 aaKnown RBP11.07□□□□□ -0.64
SF3B3-203ENST00000562874 HERC2O95714 4834 aa11.07□□□□□ -0.64
SF3B3-203ENST00000562874 NUDT3O95989 172 aa11.06□□□□□ -0.64
SF3B3-203ENST00000562874 S100A11P31949 105 aa11.06□□□□□ -0.64
SF3B3-203ENST00000562874 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
SF3B3-203ENST00000562874 NHLH2Q02577 135 aa11.06□□□□□ -0.64
SF3B3-203ENST00000562874 C15orf53Q8NAA6 179 aa11.06□□□□□ -0.64
SF3B3-203ENST00000562874 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
SF3B3-203ENST00000562874 OR5AC2Q9NZP5 309 aa11.06□□□□□ -0.64
SF3B3-203ENST00000562874 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 H7BYZ3 331 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 UPK1BO75841 260 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 ATP5G1P05496 136 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 CT45A10P0DMU9 189 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 ATP5G3P48201 142 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 IFITM3Q01628 133 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 LGALS9BQ3B8N2 356 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 Q6ZR54 194 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 NPCDR1Q9BY65 106 aa11.05□□□□□ -0.64
SF3B3-203ENST00000562874 MUC4Q99102 2169 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 ERCC8Q13216 396 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 CLINT1Q14677 625 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 GUK1Q16774 197 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 RNF212Q495C1 297 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
SF3B3-203ENST00000562874 TIMM8BQ9Y5J9 83 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-203ENST00000562874 TRBV19A0A075B6N1 114 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 NDUFB4O95168 129 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 LEPP41159 167 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 LINC00299Q6ZSB3 139 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 C20orf144Q9BQM9 153 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 KIAA1109Q2LD37 5005 aa11.03□□□□□ -0.64
SF3B3-203ENST00000562874 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
SF3B3-203ENST00000562874 PKD1P98161 4303 aa11.02□□□□□ -0.64
SF3B3-203ENST00000562874 H0YIZ8 118 aa11.02□□□□□ -0.65
SF3B3-203ENST00000562874 ATP6V1FQ16864 119 aa11.02□□□□□ -0.65
SF3B3-203ENST00000562874 ZNF493Q6ZR52 646 aa11.02□□□□□ -0.65
SF3B3-203ENST00000562874 MIR17HGQ75NE6 70 aa11.02□□□□□ -0.65
SF3B3-203ENST00000562874 IGKV2-40A0A087WW87 121 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-203ENST00000562874 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 CBY3A6NI87 242 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 ZNF253O75346 499 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 MPDU1O75352 247 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 GAGE7O76087 117 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 IGKV2D-40P01614 121 aaPredicted RBP11.01□□□□□ -0.65
SF3B3-203ENST00000562874 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 BTN1A1Q13410 526 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 CCDC28AQ8IWP9 274 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 KRTAP17-1Q9BYP8 105 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 NMES1Q9C002 83 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 TMEM14CQ9P0S9 112 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 TIMM9Q9Y5J7 89 aa11.01□□□□□ -0.65
SF3B3-203ENST00000562874 SNURFLB1AK76 121 aa11□□□□□ -0.65
SF3B3-203ENST00000562874 E5RGE8 158 aa11□□□□□ -0.65
SF3B3-203ENST00000562874 INMT-MINDY4F8WBC2 141 aa11□□□□□ -0.65
SF3B3-203ENST00000562874 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
SF3B3-203ENST00000562874 ICAM4Q14773 271 aa11□□□□□ -0.65
SF3B3-203ENST00000562874 FAM122CQ6P4D5 195 aa11□□□□□ -0.65
SF3B3-203ENST00000562874 CHAC2Q8WUX2 184 aa11□□□□□ -0.65
SF3B3-203ENST00000562874 MRPL53Q96EL3 112 aaKnown RBP11□□□□□ -0.65
SF3B3-203ENST00000562874 PTTG2Q9NZH5 202 aa11□□□□□ -0.65
SF3B3-203ENST00000562874 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 A0A0J9YY99 117 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 C7orf71A4D174 169 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 A6NHS1 94 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 RLN2P04090 185 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 OR10J4P0C629 311 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 HOXA5P20719 270 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 H2BFSP57053 126 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 CD300CQ08708 224 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms