RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 FCN2Q15485 313 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 TMEM252Q8N6L7 170 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 S100ZQ8WXG8 99 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 SAT2Q96F10 170 aaPredicted RBP7.28□□□□□ -1.24
CLK3-205ENST00000561673 SLC50A1Q9BRV3 221 aa7.28□□□□□ -1.24
CLK3-205ENST00000561673 DYNC1H1Q14204 4646 aaKnown RBP7.28□□□□□ -1.24
CLK3-205ENST00000561673 UBE2L5PA0A1B0GUS4 154 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 LYRM9A8MSI8 78 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 M0R2N4 97 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 DEFB130BP0DP73 79 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 DEFB130AP0DP74 79 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 HTN1P15515 57 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 CDKN1BP46527 198 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 RPL29P47914 159 aaKnown RBP7.27□□□□□ -1.25
CLK3-205ENST00000561673 TAS2R60P59551 318 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 KIR3DS1Q14943 382 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 TMEM88Q6PEY1 159 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 STX12Q86Y82 276 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 TMEM256Q8N2U0 113 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 OR1L4Q8NGR5 311 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 CHAC2Q8WUX2 184 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 SLC39A9Q9NUM3 307 aa7.27□□□□□ -1.25
CLK3-205ENST00000561673 RGS13O14921 159 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 UPK1BO75841 260 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 SIX6O95475 246 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 HBG1P69891 147 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 HBG2P69892 147 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 IFITM3Q01628 133 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 BAXQ07812 192 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 GUK1Q16774 197 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 ATP6V1FQ16864 119 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 OR10J6PQ8NGY7 276 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 PFDN5Q99471 154 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 PARD6GQ9BYG4 376 aaPredicted RBP7.26□□□□□ -1.25
CLK3-205ENST00000561673 ZNF586Q9NXT0 402 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 PXMP4Q9Y6I8 212 aa7.26□□□□□ -1.25
CLK3-205ENST00000561673 KIAA1109Q2LD37 5005 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 CT45A10P0DMU9 189 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 FGF7P21781 194 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 NHLH2Q02577 135 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 LINC00336Q6ZUF6 198 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 UBE2DNLQ8IWF7 75 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 ENKURQ8TC29 256 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 C16orf74Q96GX8 76 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 GPN1Q9HCN4 374 aaPredicted RBP7.25□□□□□ -1.25
CLK3-205ENST00000561673 DNAH11Q96DT5 4516 aa7.25□□□□□ -1.25
CLK3-205ENST00000561673 IGLV2-18A0A075B6J9 118 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 TRBV19A0A075B6N1 114 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 H7BYZ3 331 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 RTL8CO15255 209 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 RNF212Q495C1 297 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 GCSAMLQ5JQS6 135 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 GFI1BQ5VTD9 330 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 RNASE8Q8TDE3 154 aaKnown RBP7.24□□□□□ -1.25
CLK3-205ENST00000561673 NPCDR1Q9BY65 106 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 NMES1Q9C002 83 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 NOP10Q9NPE3 64 aaKnown RBP7.24□□□□□ -1.25
CLK3-205ENST00000561673 OR5AC2Q9NZP5 309 aa7.24□□□□□ -1.25
CLK3-205ENST00000561673 TIMM8BQ9Y5J9 83 aaPredicted RBP7.24□□□□□ -1.25
CLK3-205ENST00000561673 CBY3A6NI87 242 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 F5H768 121 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 H0YIZ8 118 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 FAM229AH3BQW9 127 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 J3KRW8 73 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 ZNF253O75346 499 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 MPDU1O75352 247 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 RLN2P04090 185 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 LRRC37A5PQ49AS3 106 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 ZNF493Q6ZR52 646 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 Q6ZR54 194 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 C15orf53Q8NAA6 179 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 OR5C1Q8NGR4 320 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 THAP6Q8TBB0 222 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 TMEM263Q8WUH6 116 aaKnown RBP7.23□□□□□ -1.25
CLK3-205ENST00000561673 C20orf144Q9BQM9 153 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
CLK3-205ENST00000561673 TRAV12-3A0A0B4J271 114 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 A0A1B0GVY2 172 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 E5RGE8 158 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 NPIPB6E9PJ23 425 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 INMT-MINDY4F8WBC2 141 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 M0R3E3 92 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 NDUFB4O95168 129 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 ATP5G1P05496 136 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 PYYP10082 97 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 HIST1H1EP10412 219 aaKnown RBP7.22□□□□□ -1.25
CLK3-205ENST00000561673 LEPP41159 167 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 ATP5G3P48201 142 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 ERCC8Q13216 396 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 BLNKQ8WV28 456 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 MRPL53Q96EL3 112 aaKnown RBP7.22□□□□□ -1.25
CLK3-205ENST00000561673 ODF3Q96PU9 254 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 SLC25A31Q9H0C2 315 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 TIMM9Q9Y5J7 89 aa7.22□□□□□ -1.25
CLK3-205ENST00000561673 PRSS29PA6NIE9 313 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 PRAF2O60831 178 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 NUDT3O95989 172 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 H2BFSP57053 126 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms