RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 LINC01587Q99440 93 aa17.86■□□□□ 0.45
NME3-202ENST00000561637 PPP1R14DQ9NXH3 145 aa17.86■□□□□ 0.45
NME3-202ENST00000561637 ZNF586Q9NXT0 402 aa17.86■□□□□ 0.45
NME3-202ENST00000561637 OR5AC2Q9NZP5 309 aa17.86■□□□□ 0.45
NME3-202ENST00000561637 PXMP4Q9Y6I8 212 aa17.86■□□□□ 0.45
NME3-202ENST00000561637 M0R2N4 97 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 P0DMU3 169 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 FAM231AP0DMU4 169 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 FAM231CP0DMU5 169 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 HTN1P15515 57 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 S100A11P31949 105 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 NHLH2Q02577 135 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 RAB31Q13636 194 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 Q6ZRG5 221 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 STX12Q86Y82 276 aa17.85■□□□□ 0.45
NME3-202ENST00000561637 H0YIZ8 118 aa17.84■□□□□ 0.45
NME3-202ENST00000561637 DEFB130BP0DP73 79 aa17.84■□□□□ 0.45
NME3-202ENST00000561637 DEFB130AP0DP74 79 aa17.84■□□□□ 0.45
NME3-202ENST00000561637 RPL29P47914 159 aaKnown RBP17.84■□□□□ 0.45
NME3-202ENST00000561637 LRRC37A5PQ49AS3 106 aa17.83■□□□□ 0.44
NME3-202ENST00000561637 OR1L4Q8NGR5 311 aa17.83■□□□□ 0.44
NME3-202ENST00000561637 THAP6Q8TBB0 222 aa17.83■□□□□ 0.44
NME3-202ENST00000561637 RNF24Q9Y225 148 aa17.83■□□□□ 0.44
NME3-202ENST00000561637 J3KRW8 73 aa17.82■□□□□ 0.44
NME3-202ENST00000561637 TSPOP30536 169 aa17.82■□□□□ 0.44
NME3-202ENST00000561637 CDKN1BP46527 198 aa17.82■□□□□ 0.44
NME3-202ENST00000561637 HBG1P69891 147 aa17.82■□□□□ 0.44
NME3-202ENST00000561637 HBG2P69892 147 aa17.82■□□□□ 0.44
NME3-202ENST00000561637 PTTG2Q9NZH5 202 aa17.82■□□□□ 0.44
NME3-202ENST00000561637 PYYP10082 97 aa17.81■□□□□ 0.44
NME3-202ENST00000561637 GFI1BQ5VTD9 330 aa17.81■□□□□ 0.44
NME3-202ENST00000561637 ZNF575Q86XF7 245 aa17.81■□□□□ 0.44
NME3-202ENST00000561637 NPCDR1Q9BY65 106 aa17.81■□□□□ 0.44
NME3-202ENST00000561637 NACAE9PAV3 2078 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 IGLV2-18A0A075B6J9 118 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 LYRM9A8MSI8 78 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 INMT-MINDY4F8WBC2 141 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 M0R3E3 92 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 CT45A10P0DMU9 189 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 TAS2R60P59551 318 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 FAM210BQ96KR6 192 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 PFDN5Q99471 154 aa17.8■□□□□ 0.44
NME3-202ENST00000561637 NDUFB4O95168 129 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 CLINT1Q14677 625 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 ATP6V1FQ16864 119 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 UBE2DNLQ8IWF7 75 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 TMEM256Q8N2U0 113 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 OR5C1Q8NGR4 320 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 OR10J6PQ8NGY7 276 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 CHAC2Q8WUX2 184 aa17.79■□□□□ 0.44
NME3-202ENST00000561637 H2BFSP57053 126 aa17.78■□□□□ 0.44
NME3-202ENST00000561637 ERCC8Q13216 396 aa17.78■□□□□ 0.44
NME3-202ENST00000561637 TRBV19A0A075B6N1 114 aa17.77■□□□□ 0.44
NME3-202ENST00000561637 MIR17HGQ75NE6 70 aa17.77■□□□□ 0.44
NME3-202ENST00000561637 RNASE8Q8TDE3 154 aaKnown RBP17.77■□□□□ 0.44
NME3-202ENST00000561637 SLC25A2Q9BXI2 301 aa17.77■□□□□ 0.44
NME3-202ENST00000561637 NMES1Q9C002 83 aa17.77■□□□□ 0.44
NME3-202ENST00000561637 NOP10Q9NPE3 64 aaKnown RBP17.77■□□□□ 0.44
NME3-202ENST00000561637 NPIPB6E9PJ23 425 aa17.76■□□□□ 0.43
NME3-202ENST00000561637 BLNKQ8WV28 456 aa17.76■□□□□ 0.43
NME3-202ENST00000561637 C16orf74Q96GX8 76 aa17.76■□□□□ 0.43
NME3-202ENST00000561637 E5RGE8 158 aa17.75■□□□□ 0.43
NME3-202ENST00000561637 F5H768 121 aa17.75■□□□□ 0.43
NME3-202ENST00000561637 GUK1Q16774 197 aa17.75■□□□□ 0.43
NME3-202ENST00000561637 EXOC3-AS1Q8N2X6 119 aa17.75■□□□□ 0.43
NME3-202ENST00000561637 FAM167A-AS1Q96KT0 104 aa17.75■□□□□ 0.43
NME3-202ENST00000561637 TMEM14CQ9P0S9 112 aa17.75■□□□□ 0.43
NME3-202ENST00000561637 H7BYZ3 331 aa17.74■□□□□ 0.43
NME3-202ENST00000561637 PRAF2O60831 178 aa17.74■□□□□ 0.43
NME3-202ENST00000561637 MARVELD1Q9BSK0 173 aa17.74■□□□□ 0.43
NME3-202ENST00000561637 TRAV12-3A0A0B4J271 114 aa17.73■□□□□ 0.43
NME3-202ENST00000561637 MPDU1O75352 247 aa17.73■□□□□ 0.43
NME3-202ENST00000561637 HIST1H1EP10412 219 aaKnown RBP17.73■□□□□ 0.43
NME3-202ENST00000561637 TMEM263Q8WUH6 116 aaKnown RBP17.73■□□□□ 0.43
NME3-202ENST00000561637 ZNF253O75346 499 aa17.72■□□□□ 0.43
NME3-202ENST00000561637 RLN2P04090 185 aa17.72■□□□□ 0.43
NME3-202ENST00000561637 LGALS9BQ3B8N2 356 aa17.72■□□□□ 0.43
NME3-202ENST00000561637 PPP1R1CQ8WVI7 109 aa17.72■□□□□ 0.43
NME3-202ENST00000561637 SLC25A31Q9H0C2 315 aa17.72■□□□□ 0.43
NME3-202ENST00000561637 TIMM8BQ9Y5J9 83 aaPredicted RBP17.72■□□□□ 0.43
NME3-202ENST00000561637 Q6ZR54 194 aa17.71■□□□□ 0.43
NME3-202ENST00000561637 WDR61Q9GZS3 305 aaKnown RBP17.71■□□□□ 0.43
NME3-202ENST00000561637 TIMM9Q9Y5J7 89 aa17.71■□□□□ 0.43
NME3-202ENST00000561637 IGKV2-40A0A087WW87 121 aaPredicted RBP17.7■□□□□ 0.42
NME3-202ENST00000561637 CBY3A6NI87 242 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 IGKV2D-40P01614 121 aaPredicted RBP17.7■□□□□ 0.42
NME3-202ENST00000561637 ATP5G1P05496 136 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 LEPP41159 167 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 ATP5G3P48201 142 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 ZNF493Q6ZR52 646 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 ODF3Q96PU9 254 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 C20orf144Q9BQM9 153 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 AGPAT4-IT1Q9H0P7 198 aa17.7■□□□□ 0.42
NME3-202ENST00000561637 SSNA1O43805 119 aa17.69■□□□□ 0.42
NME3-202ENST00000561637 EIF3GO75821 320 aaKnown RBP eCLIP17.69■□□□□ 0.42
NME3-202ENST00000561637 NUDT3O95989 172 aa17.69■□□□□ 0.42
NME3-202ENST00000561637 ICAM4Q14773 271 aa17.69■□□□□ 0.42
NME3-202ENST00000561637 MRPL53Q96EL3 112 aaKnown RBP17.69■□□□□ 0.42
NME3-202ENST00000561637 SMIM3Q9BZL3 60 aa17.69■□□□□ 0.42
NME3-202ENST00000561637 OR10J4P0C629 311 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms