RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 HECTD4Q9Y4D8 3996 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 PRAF2O60831 178 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 HTN1P15515 57 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 TSPOP30536 169 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 NHLH2Q02577 135 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 ATP6V1FQ16864 119 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 GCSAMLQ5JQS6 135 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 TMEM88Q6PEY1 159 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 OR5C1Q8NGR4 320 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 OR10J6PQ8NGY7 276 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 NMES1Q9C002 83 aa12.18□□□□□ -0.46
CDC42BPB-208ENST00000561271 LYRM9A8MSI8 78 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 E5RGE8 158 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 H0YIZ8 118 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 DEFB130BP0DP73 79 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 DEFB130AP0DP74 79 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 CLINT1Q14677 625 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 FCN2Q15485 313 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 GUK1Q16774 197 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 CHAC2Q8WUX2 184 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 FAM210BQ96KR6 192 aa12.17□□□□□ -0.46
CDC42BPB-208ENST00000561271 J3KRW8 73 aa12.16□□□□□ -0.46
CDC42BPB-208ENST00000561271 MPDU1O75352 247 aa12.16□□□□□ -0.46
CDC42BPB-208ENST00000561271 PYYP10082 97 aa12.16□□□□□ -0.46
CDC42BPB-208ENST00000561271 TAS2R60P59551 318 aa12.16□□□□□ -0.46
CDC42BPB-208ENST00000561271 GFI1BQ5VTD9 330 aa12.16□□□□□ -0.46
CDC42BPB-208ENST00000561271 SLC25A31Q9H0C2 315 aa12.16□□□□□ -0.46
CDC42BPB-208ENST00000561271 MUC4Q99102 2169 aa12.16□□□□□ -0.46
CDC42BPB-208ENST00000561271 M0R3E3 92 aa12.15□□□□□ -0.46
CDC42BPB-208ENST00000561271 RLN2P04090 185 aa12.15□□□□□ -0.46
CDC42BPB-208ENST00000561271 H2BFSP57053 126 aa12.15□□□□□ -0.46
CDC42BPB-208ENST00000561271 C16orf74Q96GX8 76 aa12.15□□□□□ -0.46
CDC42BPB-208ENST00000561271 MARVELD1Q9BSK0 173 aa12.15□□□□□ -0.46
CDC42BPB-208ENST00000561271 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 NPIPB6E9PJ23 425 aa12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 ZNF253O75346 499 aa12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 RNASE8Q8TDE3 154 aaKnown RBP12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 TMEM263Q8WUH6 116 aaKnown RBP12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 BLNKQ8WV28 456 aa12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 SLC25A2Q9BXI2 301 aa12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
CDC42BPB-208ENST00000561271 DNAH2Q9P225 4427 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 H7BYZ3 331 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 M0R2N4 97 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 SSNA1O43805 119 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 NDUFB4O95168 129 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 CT45A10P0DMU9 189 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 DEFA1P59665 94 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 DEFA3P59666 94 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 CYCSP99999 105 aaKnown RBP12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 PPP1R1CQ8WVI7 109 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
CDC42BPB-208ENST00000561271 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 LEPP41159 167 aa12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 MIR17HGQ75NE6 70 aa12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 MRPL53Q96EL3 112 aaKnown RBP12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 ODF3Q96PU9 254 aa12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 FAT2Q9NYQ8 4349 aa12.12□□□□□ -0.47
CDC42BPB-208ENST00000561271 DNAH17Q9UFH2 4485 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 IGLV2-18A0A075B6J9 118 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 TRAV12-3A0A0B4J271 114 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 F5H768 121 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 ERCC8Q13216 396 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 PDE6HQ13956 83 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 FAM167A-AS1Q96KT0 104 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 KCNIP2Q9NS61 270 aa12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 TIMM8BQ9Y5J9 83 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPB-208ENST00000561271 MPC2O95563 127 aa12.1□□□□□ -0.47
CDC42BPB-208ENST00000561271 ATP5G1P05496 136 aa12.1□□□□□ -0.47
CDC42BPB-208ENST00000561271 ATP5G3P48201 142 aa12.1□□□□□ -0.47
CDC42BPB-208ENST00000561271 C15orf53Q8NAA6 179 aa12.1□□□□□ -0.47
CDC42BPB-208ENST00000561271 ATP5SQ99766 215 aa12.1□□□□□ -0.47
CDC42BPB-208ENST00000561271 OR10J4P0C629 311 aa12.09□□□□□ -0.47
CDC42BPB-208ENST00000561271 MRPL32Q9BYC8 188 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-208ENST00000561271 SMIM3Q9BZL3 60 aa12.09□□□□□ -0.47
CDC42BPB-208ENST00000561271 AAMDCQ9H7C9 122 aa12.09□□□□□ -0.47
CDC42BPB-208ENST00000561271 MBD2Q9UBB5 411 aa12.09□□□□□ -0.47
CDC42BPB-208ENST00000561271 PRELID1Q9Y255 219 aa12.09□□□□□ -0.47
CDC42BPB-208ENST00000561271 HSPB11Q9Y547 144 aa12.09□□□□□ -0.47
CDC42BPB-208ENST00000561271 IGKV2-40A0A087WW87 121 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 CBY3A6NI87 242 aa12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 IGKV2D-40P01614 121 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 PET100P0DJ07 73 aa12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 ICAM4Q14773 271 aa12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 FAM122CQ6P4D5 195 aa12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 CCDC28AQ8IWP9 274 aa12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
CDC42BPB-208ENST00000561271 C7orf71A4D174 169 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 C17orf112F2Z3M2 114 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 NUDT3O95989 172 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 BTN1A1Q13410 526 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 RNF212Q495C1 297 aa12.07□□□□□ -0.48
CDC42BPB-208ENST00000561271 FXYD5Q96DB9 178 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms