RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
SNX1-213ENST00000561026 NUDT15Q9NV35 164 aa11.37□□□□□ -0.59
SNX1-213ENST00000561026 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
SNX1-213ENST00000561026 VWC2Q2TAL6 325 aa11.36□□□□□ -0.59
SNX1-213ENST00000561026 MIC13Q5XKP0 118 aa11.36□□□□□ -0.59
SNX1-213ENST00000561026 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
SNX1-213ENST00000561026 PARD6GQ9BYG4 376 aaPredicted RBP11.36□□□□□ -0.59
SNX1-213ENST00000561026 UQCC1Q9NVA1 299 aa11.36□□□□□ -0.59
SNX1-213ENST00000561026 TRAV5A0A0B4J249 113 aa11.35□□□□□ -0.59
SNX1-213ENST00000561026 PVALBP20472 110 aaPredicted RBP11.35□□□□□ -0.59
SNX1-213ENST00000561026 GUK1Q16774 197 aa11.35□□□□□ -0.59
SNX1-213ENST00000561026 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
SNX1-213ENST00000561026 OR1L4Q8NGR5 311 aa11.35□□□□□ -0.59
SNX1-213ENST00000561026 ZNRF2Q8NHG8 242 aa11.35□□□□□ -0.59
SNX1-213ENST00000561026 DNAH11Q96DT5 4516 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 S100A11P31949 105 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 RPL29P47914 159 aaKnown RBP11.34□□□□□ -0.59
SNX1-213ENST00000561026 SULT1A1P50225 295 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 CCL18P55774 89 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 IL15RAQ13261 267 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 CCDC28AQ8IWP9 274 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 RNF141Q8WVD5 230 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 PFDN5Q99471 154 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 LYRM2Q9NU23 88 aaPredicted RBP11.34□□□□□ -0.59
SNX1-213ENST00000561026 SLC39A9Q9NUM3 307 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 NDUFA13Q9P0J0 144 aa11.34□□□□□ -0.59
SNX1-213ENST00000561026 H2AFB2P0C5Z0 115 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 CT45A10P0DMU9 189 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 TMEM252Q8N6L7 170 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 CHAC2Q8WUX2 184 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 ODF3Q96PU9 254 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 CCDC32Q9BV29 185 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 ZNF586Q9NXT0 402 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
SNX1-213ENST00000561026 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
SNX1-213ENST00000561026 NBDYA0A0U1RRE5 68 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 UBE2L5PA0A1B0GUS4 154 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 IGSF23A1L1A6 192 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 ZNF253O75346 499 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 S100A10P60903 97 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 HBG1P69891 147 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 HBG2P69892 147 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 RAB32Q13637 225 aa11.32□□□□□ -0.6
SNX1-213ENST00000561026 J3KRW8 73 aa11.31□□□□□ -0.6
SNX1-213ENST00000561026 LEPP41159 167 aa11.31□□□□□ -0.6
SNX1-213ENST00000561026 BAXQ07812 192 aa11.31□□□□□ -0.6
SNX1-213ENST00000561026 STX12Q86Y82 276 aa11.31□□□□□ -0.6
SNX1-213ENST00000561026 TRBV19A0A075B6N1 114 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 FAM240BA0A1B0GVZ2 78 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 OR5I1Q13606 314 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 CLINT1Q14677 625 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 MRPL53Q96EL3 112 aaKnown RBP11.3□□□□□ -0.6
SNX1-213ENST00000561026 TMEM14CQ9P0S9 112 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 MUC4Q99102 2169 aa11.3□□□□□ -0.6
SNX1-213ENST00000561026 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 RLN2P04090 185 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 M6PRP20645 277 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 FGF7P21781 194 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 ATP6V1FQ16864 119 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 ZNF575Q86XF7 245 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 GNPNAT1Q96EK6 184 aaPredicted RBP11.29□□□□□ -0.6
SNX1-213ENST00000561026 ZNF503Q96F45 646 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
SNX1-213ENST00000561026 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 M0R3E3 92 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 MPDU1O75352 247 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 GAGE7O76087 117 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 NDUFB4O95168 129 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 GAGE12FP0CL80 117 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 GAGE12GP0CL81 117 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 GAGE12IP0CL82 117 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
SNX1-213ENST00000561026 HOXA5P20719 270 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 TNP2Q05952 138 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 DAZ2Q13117 558 aaKnown RBP11.28□□□□□ -0.6
SNX1-213ENST00000561026 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 GPN1Q9HCN4 374 aaPredicted RBP11.28□□□□□ -0.6
SNX1-213ENST00000561026 SLC25A5P05141 298 aaKnown RBP11.28□□□□□ -0.6
SNX1-213ENST00000561026 ERCC8Q13216 396 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 PDE6HQ13956 83 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 MZT2BQ6NZ67 158 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 Q9H8V8 135 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 PRELID1Q9Y255 219 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 TIMM9Q9Y5J7 89 aa11.28□□□□□ -0.6
SNX1-213ENST00000561026 RYR1P21817 5038 aa11.27□□□□□ -0.6
SNX1-213ENST00000561026 A0A0J9YY99 117 aa11.27□□□□□ -0.61
SNX1-213ENST00000561026 C7orf71A4D174 169 aa11.27□□□□□ -0.61
SNX1-213ENST00000561026 H3BNG1 76 aa11.27□□□□□ -0.61
SNX1-213ENST00000561026 PYYP10082 97 aa11.27□□□□□ -0.61
SNX1-213ENST00000561026 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.61
SNX1-213ENST00000561026 LINC00299Q6ZSB3 139 aa11.27□□□□□ -0.61
SNX1-213ENST00000561026 FAM19A4Q96LR4 140 aa11.27□□□□□ -0.61
SNX1-213ENST00000561026 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 661.8 ms