RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 G3V318 75 aa11.35□□□□□ -0.59
CRTC3-210ENST00000560927 G0S2P27469 103 aa11.35□□□□□ -0.59
CRTC3-210ENST00000560927 RIGQ13278 110 aa11.35□□□□□ -0.59
CRTC3-210ENST00000560927 TMEM70Q9BUB7 260 aa11.35□□□□□ -0.59
CRTC3-210ENST00000560927 SH2D1AO60880 128 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 RPLP1P05386 114 aaKnown RBP11.34□□□□□ -0.59
CRTC3-210ENST00000560927 FAM162BQ5T6X4 162 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 Q6ZN92 141 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 FAM110DQ8TAY7 271 aaPredicted RBP11.34□□□□□ -0.59
CRTC3-210ENST00000560927 TXN2Q99757 166 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 VGLL1Q99990 258 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 CLEC3BP05452 202 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 RHOGP84095 191 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 RELQ04864 619 aaPredicted RBP11.34□□□□□ -0.59
CRTC3-210ENST00000560927 ZNF502Q8TBZ5 544 aa11.34□□□□□ -0.59
CRTC3-210ENST00000560927 TRAV9-2A0A087WT02 112 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 LEPROTL1O95214 131 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 IGLL1P15814 213 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 MUC21Q5SSG8 566 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 LYZL1Q6UWQ5 148 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 PRR25Q96S07 402 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 CELSR1Q9NYQ6 3014 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 TMEM189A5PLL7 270 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 GNLYP22749 145 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
CRTC3-210ENST00000560927 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
CRTC3-210ENST00000560927 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 TMEM213A2RRL7 107 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 CRXO43186 299 aaPredicted RBP11.32□□□□□ -0.6
CRTC3-210ENST00000560927 KLHDC1Q8N7A1 406 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 IGHV3-66A0A0C4DH42 116 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 CENPVL3A0A0U1RRI6 287 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 SCGB2A1O75556 95 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 TFPI2P48307 235 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
CRTC3-210ENST00000560927 CCDC140Q96MF4 163 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 PRORYQ9H606 182 aa11.32□□□□□ -0.6
CRTC3-210ENST00000560927 IGHV3OR16-10A0A075B7F0 116 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 NPFFO15130 113 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 ZNF25P17030 456 aaPredicted RBP11.31□□□□□ -0.6
CRTC3-210ENST00000560927 Q6AWC8 147 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 MCRIP2Q9BUT9 160 aaKnown RBP11.31□□□□□ -0.6
CRTC3-210ENST00000560927 IGHV3OR16-13A0A075B7E8 117 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 IGHV3-74A0A0B4J1X5 117 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 CLEC19AQ6UXS0 136 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 TP73-AS1Q9UF72 201 aa11.31□□□□□ -0.6
CRTC3-210ENST00000560927 TIMM8BQ9Y5J9 83 aaPredicted RBP11.31□□□□□ -0.6
CRTC3-210ENST00000560927 SPTAN1Q13813 2472 aaKnown RBP11.3□□□□□ -0.6
CRTC3-210ENST00000560927 A0A1B0GW15 77 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 PRAC2D3DTV9 90 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 BUB3O43684 328 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 COX8CQ7Z4L0 72 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 CLPSL1A2RUU4 121 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 IGHV4-39P01824 125 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 TSPOP30536 169 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 ZNF493Q6ZR52 646 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
CRTC3-210ENST00000560927 ERCC8Q13216 396 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 KLK9Q2XQG4 91 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 KLK9Q9UKQ9 250 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 LAMTOR2Q9Y2Q5 125 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 ABCA2Q9BZC7 2435 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 COL12A1Q99715 3063 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 IGHV3-49A0A0A0MS15 119 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 H0Y8G0 127 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 STPG4Q8N801 248 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 C5orf56Q8N8D9 126 aa11.29□□□□□ -0.6
CRTC3-210ENST00000560927 hDV102S1A0JD36 115 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 D6R8Y8 96 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 ZNF207O43670 478 aaKnown RBP11.28□□□□□ -0.6
CRTC3-210ENST00000560927 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
CRTC3-210ENST00000560927 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 TMEM208Q9BTX3 173 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 LINC00527Q9UJ94 153 aa11.28□□□□□ -0.6
CRTC3-210ENST00000560927 SFTPCP11686 197 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 LOXL1Q08397 574 aaPredicted RBP11.27□□□□□ -0.61
CRTC3-210ENST00000560927 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 LOC389332A0A1B0GUA5 103 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 C20orf202A1L168 122 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 GOSR1O95249 250 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 COL5A1-AS1Q5SY13 56 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 BRD3OSQ6XYD6 125 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 PMCHL2Q9BQD1 86 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 MAP1LC3CQ9BXW4 147 aa11.27□□□□□ -0.61
CRTC3-210ENST00000560927 PSMG3-AS1Q96PY0 264 aa11.26□□□□□ -0.61
CRTC3-210ENST00000560927 A0A087X0K7 114 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms