RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 RETNQ9HD89 108 aa12.32□□□□□ -0.44
RPL28-211ENST00000560881 LOC102724200A0A096LPH7 203 aaPredicted RBP12.31□□□□□ -0.44
RPL28-211ENST00000560881 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
RPL28-211ENST00000560881 HOXA5P20719 270 aa12.31□□□□□ -0.44
RPL28-211ENST00000560881 GPR82Q96P67 336 aa12.31□□□□□ -0.44
RPL28-211ENST00000560881 TENM3Q9P273 2699 aa12.31□□□□□ -0.44
RPL28-211ENST00000560881 C17orf112F2Z3M2 114 aa12.3□□□□□ -0.44
RPL28-211ENST00000560881 H3BTX0 84 aa12.3□□□□□ -0.44
RPL28-211ENST00000560881 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
RPL28-211ENST00000560881 FFAR4Q5NUL3 377 aa12.3□□□□□ -0.44
RPL28-211ENST00000560881 HSD17B11Q8NBQ5 300 aa12.3□□□□□ -0.44
RPL28-211ENST00000560881 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
RPL28-211ENST00000560881 YPEL4Q96NS1 127 aa12.3□□□□□ -0.44
RPL28-211ENST00000560881 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
RPL28-211ENST00000560881 SEPSECSQ9HD40 501 aaKnown RBP12.3□□□□□ -0.44
RPL28-211ENST00000560881 PRB4P10163 310 aaPredicted RBP12.29□□□□□ -0.44
RPL28-211ENST00000560881 AKR1C3P42330 323 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 CMC4P56277 68 aaPredicted RBP12.29□□□□□ -0.44
RPL28-211ENST00000560881 FAM78BQ5VT40 261 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 S100A7AQ86SG5 101 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 GATAD1Q8WUU5 269 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 C16orf92Q96LL3 132 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 SLC35B3Q9H1N7 401 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 KCNIP2Q9NS61 270 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 NBEAL2Q6ZNJ1 2754 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 UMAD1C9J7I0 102 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 HLA-DMBP28068 263 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 ZNF266Q14584 549 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 ACTL10Q5JWF8 245 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 GDF5OSQ5U4N7 250 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 MIR17HGQ75NE6 70 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 RNF182Q8N6D2 247 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 TM2D3Q9BRN9 247 aa12.29□□□□□ -0.44
RPL28-211ENST00000560881 TRAV8-2A0A0B4J237 113 aa12.28□□□□□ -0.44
RPL28-211ENST00000560881 PSMB3P49720 205 aa12.28□□□□□ -0.44
RPL28-211ENST00000560881 BPIFA4PQ86YQ2 179 aa12.28□□□□□ -0.44
RPL28-211ENST00000560881 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
RPL28-211ENST00000560881 A0A087X0K7 114 aa12.27□□□□□ -0.45
RPL28-211ENST00000560881 H3BQ15 152 aa12.27□□□□□ -0.45
RPL28-211ENST00000560881 ISLRO14498 428 aa12.27□□□□□ -0.45
RPL28-211ENST00000560881 PYYP10082 97 aa12.27□□□□□ -0.45
RPL28-211ENST00000560881 STHQ8IWL8 128 aa12.27□□□□□ -0.45
RPL28-211ENST00000560881 ISOC2Q96AB3 205 aa12.27□□□□□ -0.45
RPL28-211ENST00000560881 SLC25A2Q9BXI2 301 aa12.27□□□□□ -0.45
RPL28-211ENST00000560881 F6UB75 175 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 SLC17A3O00476 420 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
RPL28-211ENST00000560881 IGLC2P0DOY2 106 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 ATP6V0CP27449 155 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 S100A2P29034 98 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 ID1P41134 155 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 EIF5A2Q9GZV4 153 aaKnown RBP12.26□□□□□ -0.45
RPL28-211ENST00000560881 A0A087WWC5 75 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 TRPT1Q86TN4 253 aaKnown RBP12.26□□□□□ -0.45
RPL28-211ENST00000560881 FAM167A-AS1Q96KT0 104 aa12.26□□□□□ -0.45
RPL28-211ENST00000560881 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
RPL28-211ENST00000560881 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
RPL28-211ENST00000560881 ZNF586Q9NXT0 402 aa12.25□□□□□ -0.45
RPL28-211ENST00000560881 RNF24Q9Y225 148 aa12.25□□□□□ -0.45
RPL28-211ENST00000560881 FUT9Q9Y231 359 aa12.25□□□□□ -0.45
RPL28-211ENST00000560881 TIMM9Q9Y5J7 89 aa12.25□□□□□ -0.45
RPL28-211ENST00000560881 IGKV3-20P01619 116 aa12.24□□□□□ -0.45
RPL28-211ENST00000560881 APOC4P55056 127 aa12.24□□□□□ -0.45
RPL28-211ENST00000560881 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
RPL28-211ENST00000560881 SPATA25Q9BR10 227 aa12.24□□□□□ -0.45
RPL28-211ENST00000560881 U3KQK5 164 aa12.24□□□□□ -0.45
RPL28-211ENST00000560881 CXorf65A6NEN9 183 aa12.23□□□□□ -0.45
RPL28-211ENST00000560881 SOHLH1Q5JUK2 328 aa12.23□□□□□ -0.45
RPL28-211ENST00000560881 SAMD13Q5VXD3 122 aa12.23□□□□□ -0.45
RPL28-211ENST00000560881 MRPL32Q9BYC8 188 aaKnown RBP12.23□□□□□ -0.45
RPL28-211ENST00000560881 ZNF331Q9NQX6 463 aaPredicted RBP12.23□□□□□ -0.45
RPL28-211ENST00000560881 KIR2DL5BA0A0G2JN68 375 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 KIR2DL5BA0A0G2JPC4 375 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 H3BMM0 161 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 NDUFS6O75380 124 aaKnown RBP12.22□□□□□ -0.45
RPL28-211ENST00000560881 CA1P00915 261 aaPredicted RBP12.22□□□□□ -0.45
RPL28-211ENST00000560881 OR10J4P0C629 311 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 ZNF705DP0CH99 300 aaPredicted RBP12.22□□□□□ -0.45
RPL28-211ENST00000560881 ZNF705BP0CI00 300 aaPredicted RBP12.22□□□□□ -0.45
RPL28-211ENST00000560881 HLA-DRB4P13762 266 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 ACOT6Q3I5F7 207 aaPredicted RBP12.22□□□□□ -0.45
RPL28-211ENST00000560881 LCN15Q6UWW0 184 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 KIR2DL5AQ8N109 375 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 KIR2DL5BQ8NHK3 375 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 ZNF503Q96F45 646 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 CSTL1Q9H114 145 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 RPRMQ9NS64 109 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 HLA-DRB4X5D2U9 266 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 HMGB3O15347 200 aaKnown RBP12.22□□□□□ -0.45
RPL28-211ENST00000560881 PYY3Q5JQD4 70 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 OR2G3Q8NGZ4 309 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 BLNKQ8WV28 456 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 PSMG3Q9BT73 122 aaPredicted RBP12.22□□□□□ -0.45
RPL28-211ENST00000560881 TMEM14CQ9P0S9 112 aa12.22□□□□□ -0.45
RPL28-211ENST00000560881 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
RPL28-211ENST00000560881 OR7C2O60412 319 aa12.21□□□□□ -0.45
RPL28-211ENST00000560881 GIG44P09565 113 aaPredicted RBP12.21□□□□□ -0.45
RPL28-211ENST00000560881 RPS10P46783 165 aaKnown RBP12.21□□□□□ -0.45
RPL28-211ENST00000560881 RHOBP62745 196 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms