RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 LINC00476Q8WZB0 136 aa9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 SAT2Q96F10 170 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 MRPL32Q9BYC8 188 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 AAMDCQ9H7C9 122 aa9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 TMEM14CQ9P0S9 112 aa9.33□□□□□ -0.92
CTDSPL2-209ENST00000560620 ZNF705GA8MUZ8 300 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 J3KRW8 73 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 OR7C2O60412 319 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 ZNF253O75346 499 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 OR10J4P0C629 311 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 CDKN1BP46527 198 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 RPP25LQ8N5L8 163 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 LINC01587Q99440 93 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 SLC25A2Q9BXI2 301 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 OR51M1Q9H341 326 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 YTHDF2Q9Y5A9 579 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-209ENST00000560620 DEFB131BA0A096LNP1 70 aa9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 CRXO43186 299 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 TSPOP30536 169 aa9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 PDE6HQ13956 83 aa9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 EXOC3-AS1Q8N2X6 119 aa9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 PAXXQ9BUH6 204 aa9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 PARD6GQ9BYG4 376 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL2-209ENST00000560620 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 M0R3E3 92 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 PRM2P04554 102 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 GIPP09681 153 aaPredicted RBP9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 NBEAP1P0C6P0 100 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 HTN3P15516 51 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 ICAM4Q14773 271 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 FAM122CQ6P4D5 195 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 NIPSNAP3BQ9BS92 247 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 WFDC1Q9HC57 220 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 PRELID1Q9Y255 219 aa9.3□□□□□ -0.92
CTDSPL2-209ENST00000560620 FXYD6-FXYD2A0A087WZ82 144 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 A0A1W2PPV4 95 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 NDUFB4O95168 129 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 LEPP41159 167 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 TAS2R45P59539 299 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 UBE2L3P68036 154 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 ZNF266Q14584 549 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 ACOT6Q3I5F7 207 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 KHDC3LQ587J8 217 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 INO80EQ8NBZ0 244 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 MRPL53Q96EL3 112 aaKnown RBP9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 FAM167A-AS1Q96KT0 104 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 DKK2Q9UBU2 259 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 SACSQ9NZJ4 4579 aa9.29□□□□□ -0.92
CTDSPL2-209ENST00000560620 DYNC2H1Q8NCM8 4307 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 IGHV4-4A0A075B6R2 117 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 NPIPB6E9PJ23 425 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 TCTAP57738 103 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 DAD1P61803 113 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 ERCC8Q13216 396 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 HSD17B11Q8NBQ5 300 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 ASB13Q8WXK3 278 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 HYDINQ4G0P3 5121 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 LYSTQ99698 3801 aa9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 PLECQ15149 4684 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-209ENST00000560620 H7BYZ3 331 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 CT45A10P0DMU9 189 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 AZU1P20160 251 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 M6PRP20645 277 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 CSN1S1P47710 185 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 TAS2R60P59551 318 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 RANP62826 216 aaKnown RBP9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 KIR3DS1Q14943 382 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 Q5BKY6 102 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 TMEM78Q5T7P6 136 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 GFI1BQ5VTD9 330 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 OR10G4Q8NGN3 311 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 OR2T35Q8NGX2 323 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 FXYD5Q96DB9 178 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 PHYHIPLQ96FC7 376 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 AQP10Q96PS8 301 aa9.27□□□□□ -0.93
CTDSPL2-209ENST00000560620 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 TRAV12-3A0A0B4J271 114 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 EIF3GO75821 320 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 RAB2AP61019 212 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 OXA1LQ15070 435 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 CCDC28AQ8IWP9 274 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 C16orf74Q96GX8 76 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 C20orf144Q9BQM9 153 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 NDUFAF3Q9BU61 184 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 APLNQ9ULZ1 77 aa9.26□□□□□ -0.93
CTDSPL2-209ENST00000560620 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
CTDSPL2-209ENST00000560620 HMGB3O15347 200 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms